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NECEvent2014_5_3_scaffold_2020_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(3..2969)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF5 RepID=U9QH65_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 989.0
  • Bit_score: 1971
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ERO60394.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 999.99
  • Bit_score: 1017
  • Evalue 1.70e-293
Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 664.0
  • Bit_score: 728
  • Evalue 1.90e-207

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Taxonomy

Pseudomonas sp. CMAA1215 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2967
CTGAGCGCCGAAGACGACCTGGAGCTGGGCGATGGCGCGCGCATCGACCTGGCCGGACGCAAGGCCAGCTTCAACGATGTGGATAAATACAGCTGGGGTGGCGACCTGCTGCTGAGCAGTCGCGCCGGCGACATCCGCCAGGCCGCCGGTTCGCTGATCGACCTGTCGGCGCGCAACAACCGCGGCGGTACCCTGAGCGCCGTGGCGTTGGCCGAGGACGCCGGGGTGGTGGACCTGCAGGGCCGCATACTGGGTGGCGCCAGCGGCGACTACGATGCCGGTGGCACCCGCGTGCCGTTCCTCGGTGGCGAGCTGGAGATCCGCGCCCAGCGCCTGGGCGACGGCGGCAGCCTGAGCGAGCAGTTCACCGCCTTGAACCAGCGCCTGAACCAGGGCGAGGTCTTCGGCGCGCGGCGCTTCCAGCTCAAGCAAGGCGACCTGCAGATCGGCGACGGCCTGAAGGCGCATCGCATCGAGGTGTCCCTCGACAATGGCCAGCTCGGCGTGAGCGGAACGGTGGACGCCAGCGGCGCGCAGGTCGGCGAGATCCGCCTGGCCGGCGGCCGCGGCCTGAGCCTGGGTGGCAACGCGCTGCTGGATGCGCATGGAAGCCTGCTGCGGCGCGACAGCTACGGGCAGATCATCGACAGCCCGAACCGGGCGATGGTCGAGCTGAGTTCCGGCAGCGGCACCTTGGTCCTGGCCAGCGGCGCGCGCATCGACCTGCGCCATGGCACCGCGGCGCCAGCGGAACAGGTTGATGGCGTCGCCCGTGGCACGTTGGAGTTGAACGCGCCACGCCTGGGCGGAGTCAGCGCCGGCGACATCGCCATCGATGCCAGCGGCGCGCTGGATATCCGCGGCGCCGGCAGCATCGCCCTGAACGCGATGCAGCGTTACGACGATGCGCCCTGGGGCAACGATCCGGCGGCCGGCGGGCGGTCCTACCAGGTGATCGACCAGGCTTACCTCGATGCGCGGCATGCCGAGAGCAGCGCGTTCATCGCCGCGGCGCTGGCCAACCGCGAGTTGCTCGACGGCAAGCTGGCCGGACTGACCAATGCCACCTACGCGGATGCTTTCCACCTGCGTCCAGGGGTGGAGATCGTCAGCGCAACGGCGGACGGCGATCTGGTGGTGCAGGGCGATCTCGATCTGTCCGGCTACCGCTACGCCAGCCTCAATCCGAACACGCCGCTGACCGAGGTCTACGGTTCCGGCGAGGTCGGCGCGCTGGTGCTACGCGCCGGCGGTGACCTGAACCTCTACGGCAGTATCAACGACGGCTTCGCGCCGCCGCCGGACTCGCCGGACGACAAGGGCTGGATCCTCACCCCGGGAGTGCAGCCGTTCGGTGGCGACCTGGTGGTTCCCGGCCCGGGCGTGGTGCTCGGCGACGGTACCGCGTTCCTCGGCGGCCGCACCCTCAACTACGACCTGCCGATCAAGGGCACCACCCTGGCCGCCGGCACCCGTCTGGCCACCGAGGCGGTACTCGAACAGCCCTATACCCTGGCCGCCGGCAGCGTGCTGGTAGCGGACATCCACGATGCCGCCGGCAACCTGCTGTACGTCGCGGGCAGCCTGCTGCGCGACGGGGTGACGCTGGAGGTCGGCAGCCGGCTGGGTGCCGGTACCCTGCTGGCGGCACCGGCCAGCGTGCAGGCGATGATCTGGCCTGCGGGCGTGCCCTTGCCGAGCATCCTGCGCGAGGGGCCCAGCAGACCCAATGTCCTGCTGCTCAATGGAGAGCTGGCCTTGGCACGTGGTTCTCTGATCCCTTCGCAGACCGAGGTGGTACTGGCTGGCGATGCGCCTTTCATCGAGTTGCGGCCCAGCGACGGTGTCCGCCAGGGACGCAACTGGGCATTGGCCGAGATGCTGCCGGCCGGTAGCCAGTCCTGGTCCATGCGCCTGGTCGCCGGTGCCGATCTCGCGGCTGCCGACAACCGTCTGGTGCGTCCGGACTCCTCGGCCAGCCTGAACCTGGCCGATACGCACTATCAGGCGAAGATCGAACAGAGCTCGGGAGGGCTGGTGTTCACCGATCAGGCTACCGACTGGGGGATCACCCCGGGAACTCCGGTCGACGAGAGCAATGAATGGATCTGCGGGCTGGGGCCGTATTGTGCCGAGCCTCCCCGCTGGACCTGGGCGCCCGGCAATTACCTGGGCATGCCTGCTGGTACGGCGATCGGCGAGGGCGATCTGTGGTGGTGCAGTGTCGATCCGTCCCTGTGTATCGAGAATCTCGGCAAAACCGTGGTCACACCGCAGAACCAGTTGTTCAGTGTGCTGCGCACCGGCACTGGCGATCTTGACCTGGCCAGTGCCGGTAACCTTACGCAATGGTCGCCGTACGGCGTCTATACCGCCGGAACGCAGGCCGCCGATGTCGCGACGGGATTCAATCAGCCTCGCGGTCTGTTCAATGGGTCGGTACTGGGCGCCGGTGGCGCGGATTACGAAGTGCTCTCAACCAGCCAGTACCAGGCCTGGTATCCGGAACATGGCGGCAACCTCGATATCGCCGTTGGCGGTGATGTGGTTGGCGATCAATGGGCCGAGAAACTGACAAGTAGCGATCCCATTCGCCCCTTGCCCCCCAGCGCTGCAGTCGGCAACTGGCTCTGGCGCCAGGGCAGCGCTGATAGGGAAGGAGTGCCGACGGCCTGGTGGGTCAATTTCGGCAGCTATGTGCGTGGCGCGGAGGGAGATGCTCCCTATCTGGTCGGCTTCACCGGTTTCGGCACTCTGGGAGGCGGCAATCTCAGCATGCGAACCGGAGGTGATGCCGGCAATATCGCGCCACGCGGAGATGGCTCGATACCTTCGTCCGGTAACCTTAATCCGCGCAGCCAGGGACTGGTCTTGGCGGTTGCCGGCACTGGCCGGCTCACCTCCGACGGCGCGCTGCAACTTGGCGGCGGCGGTGACCTGAATGTGAGAATTGGCGGGGAGGTGAAC
PROTEIN sequence
Length: 989
LSAEDDLELGDGARIDLAGRKASFNDVDKYSWGGDLLLSSRAGDIRQAAGSLIDLSARNNRGGTLSAVALAEDAGVVDLQGRILGGASGDYDAGGTRVPFLGGELEIRAQRLGDGGSLSEQFTALNQRLNQGEVFGARRFQLKQGDLQIGDGLKAHRIEVSLDNGQLGVSGTVDASGAQVGEIRLAGGRGLSLGGNALLDAHGSLLRRDSYGQIIDSPNRAMVELSSGSGTLVLASGARIDLRHGTAAPAEQVDGVARGTLELNAPRLGGVSAGDIAIDASGALDIRGAGSIALNAMQRYDDAPWGNDPAAGGRSYQVIDQAYLDARHAESSAFIAAALANRELLDGKLAGLTNATYADAFHLRPGVEIVSATADGDLVVQGDLDLSGYRYASLNPNTPLTEVYGSGEVGALVLRAGGDLNLYGSINDGFAPPPDSPDDKGWILTPGVQPFGGDLVVPGPGVVLGDGTAFLGGRTLNYDLPIKGTTLAAGTRLATEAVLEQPYTLAAGSVLVADIHDAAGNLLYVAGSLLRDGVTLEVGSRLGAGTLLAAPASVQAMIWPAGVPLPSILREGPSRPNVLLLNGELALARGSLIPSQTEVVLAGDAPFIELRPSDGVRQGRNWALAEMLPAGSQSWSMRLVAGADLAAADNRLVRPDSSASLNLADTHYQAKIEQSSGGLVFTDQATDWGITPGTPVDESNEWICGLGPYCAEPPRWTWAPGNYLGMPAGTAIGEGDLWWCSVDPSLCIENLGKTVVTPQNQLFSVLRTGTGDLDLASAGNLTQWSPYGVYTAGTQAADVATGFNQPRGLFNGSVLGAGGADYEVLSTSQYQAWYPEHGGNLDIAVGGDVVGDQWAEKLTSSDPIRPLPPSAAVGNWLWRQGSADREGVPTAWWVNFGSYVRGAEGDAPYLVGFTGFGTLGGGNLSMRTGGDAGNIAPRGDGSIPSSGNLNPRSQGLVLAVAGTGRLTSDGALQLGGGGDLNVRIGGEVN