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NECEvent2014_5_3_scaffold_1534_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 3436..3783

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 233
  • Evalue 1.10e-58
Protein rtcB n=4 Tax=Pseudomonas aeruginosa RepID=U8AIT0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 233
  • Evalue 7.90e-59
RNA-2',3'-PO4:RNA-5'-OH ligase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 233
  • Evalue 2.20e-59

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAAAGACATGAATATCCTCGAAGTGGCCGGCGGCAAGCCGATCAAGCTCTGGACCCAGGGCGTCCCGGTGGAGGAGGAAGCGCGCCAGCAGTTGCTGAACACGGCGAAGATGCCCTTCATCTTCAAGCACCTGGCGGTGATGCCTGACGTACACCTGGGCAAGGGCTCGACCATCGGTAGCGTGATCCCTACCCTCGGCGCGATCATCCCGGCCGCGGTGGGCGTGGATATCGGCTGCGGAATGATCGCCGCGCGCACCTCGCTGGTCGCTGCCGACCTGCCGGACAACCTGCACGGCCTGCGCAGCGCCATCGAGCAGGCGGTACCCCACGGCAAGACCTTCGGC
PROTEIN sequence
Length: 116
MKDMNILEVAGGKPIKLWTQGVPVEEEARQQLLNTAKMPFIFKHLAVMPDVHLGKGSTIGSVIPTLGAIIPAAVGVDIGCGMIAARTSLVAADLPDNLHGLRSAIEQAVPHGKTFG