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NECEvent2014_5_3_scaffold_1592_5

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(3288..3653)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 257
  • Evalue 2.60e-66
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 257
  • Evalue 1.30e-65
Diaminopimelate epimerase n=1 Tax=Pseudomonas aeruginosa 19660 RepID=U8ZMH7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 257
  • Evalue 9.20e-66

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
TCCATGGGCAATCCCCATGGCGTGCTGCGCGTCGAGAACGTCGACAGCGCACCGGTACACAGCCTCGGTCCGCAACTGGAAGTCCATCCGCGCTTCCCGAAGAAGGCCAACATCGGCTTCCTCCAAGTGCTCGATCCGCACCATGCGCGCCTGCGCGTCTGGGAGCGCGGCGTCGGCGAGACCCAAGCCTGCGGCACCGGCGCCTGCGCCGCGGCGGTTGCCGGGATTCGCCAGGGCTGGCTGCAATCGCCGGTGCAGATCGACCTCCCCGGCGGCCGCCTGCACATCGAGTGGGCAGGTCCCGGCCAGCCCGTTATGATGACCGGGCCTGCCGTCCGCGTGTATGAAGGCCAGGTCCGCCTGTAA
PROTEIN sequence
Length: 122
SMGNPHGVLRVENVDSAPVHSLGPQLEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPVQIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL*