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NECEvent2014_5_3_scaffold_2943_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1669..2073)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000313|EMBL:AKE70190.1}; Pseudouridylate synthase {ECO:0000313|EMBL:CKH58395.1}; EC=5.4.99.28 {ECO:0000313|EMBL:CKH58395.1};; Putative ribosomal large subunit pseudouridin similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 282
  • Evalue 3.20e-73
pseudouridine synthase n=1 Tax=Pseudomonas aeruginosa RepID=UPI00006D8F51 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 282
  • Evalue 2.30e-73
Ribosomal large subunit pseudouridine synthase A-like protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 282
  • Evalue 6.30e-74

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GACAAGTGCTACGAAGCGATCGCTCCGGCCTTGCCGCAACTGGACTTCCCGTTGCTGCGCAGGACCCGCCTGGTGCCCGGCGAGCCGTTCTTCCGCATGCGCGAAGGCGAGGGCGAGCCGAACAGCGAGACGCGCATCGAGGTCGTCGAGCGCAACGGCCGCTGGTGGCGCTACCGGCTGTATCCGGTGACCGGCAAGAAGCACCAGCTGCGCGTGCACCTCGCGGCACTCGGCGCGGGTATCCAGAACGATGGGTTCTATCCCGAGCTGCTGGACGCCGAGGGCAGCCCCGACGACTACCTGCGGCCGCTCAAGCTGCTGGCCAGGGGGCTGCGCTTCGACGACCCGCTGAGCGGGGAGAGGCGTACGTTCGAATCCGGGCTGCGGCTCGATTGGCAGGTGTAG
PROTEIN sequence
Length: 135
DKCYEAIAPALPQLDFPLLRRTRLVPGEPFFRMREGEGEPNSETRIEVVERNGRWWRYRLYPVTGKKHQLRVHLAALGAGIQNDGFYPELLDAEGSPDDYLRPLKLLARGLRFDDPLSGERRTFESGLRLDWQV*