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NECEvent2014_5_3_scaffold_3069_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(398..1039)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 9.60e-117
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 4.80e-116
ATP-dependent Clp protease proteolytic subunit 1 n=116 Tax=Pseudomonas RepID=CLPP1_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 425
  • Evalue 3.40e-116
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGTCTCGCAACTCTTTTATTCCGCACGTTCCCGATATCCAGGCCGCCGGTGGCCTGGTGCCCATGGTGGTGGAGCAGTCCGCCCGCGGCGAGCGAGCCTACGACATCTATTCGCGCCTGCTGAAGGAGCGGATCATCTTCCTGGTCGGCCAGGTCGAGGACTACATGGCCAACCTGGTGGTTGCCCAGTTGCTGTTCCTGGAGGCTGAAAATCCCGAGAAGGACATTCATCTCTACATCAACTCGCCGGGTGGCTCGGTGACTGCCGGGATGTCCATCTACGACACCATGCAGTTCATCAAGCCCAACGTCTCGACCACCTGTATCGGCCAGGCGTGCAGCATGGGTGCCCTGCTGCTTGCGGGCGGTGCCGCCGGCAAGCGTTACTGCCTGCCGCATTCGCGGATGATGATCCACCAGCCGCTGGGCGGTTTCCAGGGCCAGGCCTCGGATATCGAGATCCATGCCAAGGAAATCCTCTTCATCAAGGAGCGTCTGAACCAGATCCTGGCGCACCACACCGGCCAGCCCCTGGACGTCATTGCCCGCGATACCGATCGTGACCGCTTCATGAGCGGTGACGAAGCCGTCAAGTATGGCCTGATCGACAAGGTCATGACCCAGCGCGACCTGGCCGTCTAA
PROTEIN sequence
Length: 214
MSRNSFIPHVPDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPEKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAKEILFIKERLNQILAHHTGQPLDVIARDTDRDRFMSGDEAVKYGLIDKVMTQRDLAV*