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NECEvent2014_5_3_scaffold_3155_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(88..1521)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance protein PmpM n=68 Tax=Pseudomonas RepID=PMPM_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 477.0
  • Bit_score: 941
  • Evalue 2.40e-271
  • rbh
multidrug transporter MatE similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 477.0
  • Bit_score: 940
  • Evalue 2.00e-271
Transporter {ECO:0000313|EMBL:AHW72028.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 477.0
  • Bit_score: 940
  • Evalue 9.90e-271

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
GTGAACAGCCCCGCCCTGCCCCTTTCCCGTGGCTTGCGCATCCGCGCCGAACTCAAGGAACTGCTGACCCTCGCCGCGCCGATCATGATCGCGCAACTGGCGACCACCGCCATGGGCTTCGTCGATGCGGTGATGGCCGGGCGCGCCAGTCCGCACGACCTGGCAGCGGTGGCGCTGGGCAACTCGATCTGGATCCCGATGTTCCTGCTGATGACCGGCACCCTGCTCGCCACCACGGCCAAGGTCGCCCAGCGCCATGGCGCCGGCGACCAGCCCGGCACCGGGCCGCTGGTGCGCCAGGCGCTGTGGCTGGCGCTGCTGATCGGACCACTGTCGGGGGCGGTGCTGTGGTGGTTGTCGGAGCCGATCCTCGGCTTGATGAAAGTGCGCCCGGAACTGATCGGGCCGAGCCTGCTGTACCTCAAGGGCATCGCCCTGGGCTTCCCGGCGGCGGCGCTGTACCACGTACTGCGCTGCTACACCAACGGCCTGGGACGGACCCGGCCGAGCATGGTGCTGGGGATCGGCGGGCTGCTGCTGAACATCCCGATCAACTACGCGCTGATCTACGGCCACTTCGGCATGCCGAAGATGGGTGGCCCCGGCTGCGGCTGGGCCACCGGCTCGGGGATGTGGTTCATGTTCCTCGGCATGCTGTTCTGGGTGAACAAGGCCTCGATCTACCGCGCCAGCCAGTTGTTCTCGCGCTGGGAGTGGCCGGATCGCGCGACCATCGGCCCGCTGGTGGCGGTCGGCCTGCCGATCGGCATCGCGGTGTTCGCCGAGTCGAGCATCTTCTCGGTGATCGCCCTGCTGATCGGCGGGCTCGACGAGAACGTGGTGGCCGGCCACCAGATCGCCCTGAACTTCAGCGCGCTGGTGTTCATGATTCCCTATTCGCTGGGGATGGCGGTGACCGTGCGGGTCGGCCACAACCTCGGCGCCGGCCTGCCGCGCGACGCGCGCTTCGCCGCCGGCGTGGGGATGGCCGCGGCGCTGGGCTACGCCTGCGTCTCGGCGAGCCTGATGTTGTTGCTGCGCGAGCAGATCGCCGCGATGTATTCGCCGGACCCGGCGGTGATCGCCATCGCCGCCTCGCTGATCGTGTTCTCCGCGCTGTTCCAGTTCTCCGACGCCCTGCAGGTCACCGCCGCCGGGGCCCTGCGCGGCTACCAGGACACCCGGGTGACGATGATCATGACCCTGTTCGCCTACTGGGGCATCGGCCTGCCGGTGGGCTACAGCCTCGGCCTCACCGACTGGTTCCAGGAACCCACCGGACCGCGCGGCCTGTGGCAAGGCCTGGTGGTGGGCCTGACCGGCGCGGCGATCATGCTCTGCATCCGCCTGGCGCGCAGCGCGCGGCGCTTCATCCGCCAGCACGAGCGCCTGCAGCGGGAGGACGCGGAGGCCGCCTCAGTCCTTGGCCGGTAG
PROTEIN sequence
Length: 478
VNSPALPLSRGLRIRAELKELLTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNSIWIPMFLLMTGTLLATTAKVAQRHGAGDQPGTGPLVRQALWLALLIGPLSGAVLWWLSEPILGLMKVRPELIGPSLLYLKGIALGFPAAALYHVLRCYTNGLGRTRPSMVLGIGGLLLNIPINYALIYGHFGMPKMGGPGCGWATGSGMWFMFLGMLFWVNKASIYRASQLFSRWEWPDRATIGPLVAVGLPIGIAVFAESSIFSVIALLIGGLDENVVAGHQIALNFSALVFMIPYSLGMAVTVRVGHNLGAGLPRDARFAAGVGMAAALGYACVSASLMLLLREQIAAMYSPDPAVIAIAASLIVFSALFQFSDALQVTAAGALRGYQDTRVTMIMTLFAYWGIGLPVGYSLGLTDWFQEPTGPRGLWQGLVVGLTGAAIMLCIRLARSARRFIRQHERLQREDAEAASVLGR*