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NECEvent2014_5_3_scaffold_5408_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(755..1000)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane sensor n=1 Tax=Pseudomonas aeruginosa BL18 RepID=U8H5P6_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 171
  • Evalue 4.50e-40
iron dicitrate transporter FecR similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 170
  • Evalue 1.60e-40
Histidine kinase {ECO:0000313|EMBL:ETD46946.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa V similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 170
  • Evalue 8.10e-40

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
GCCGGAGAGGACGCCTGGGCCAGCGGCTGGCTGGAGGTCCACGACCGTTCCCTGGCCTGGGTCGCGGAGGCCTTCCGGCCCTATCTGCCAGGCATCCTCCAGCTCGACGCGGAGATCGCCGGCAACCGCGTCAGCGGTCTGTTCCCGCTGGACGACATGCACACGTCCCTGGACATGCTCGGGCGCAGCCTGCCGGTCCGCGTGCTGCGCTACAGCGACTACTGGATCAGCCTGCGCCCCGCCTGA
PROTEIN sequence
Length: 82
AGEDAWASGWLEVHDRSLAWVAEAFRPYLPGILQLDAEIAGNRVSGLFPLDDMHTSLDMLGRSLPVRVLRYSDYWISLRPA*