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NECEvent2014_5_3_scaffold_1505_3

Organism: NECEvent2014_5_3_Propionibacterium_HGH0353-rel_63_9

near complete RP 51 / 55 MC: 7 BSCG 48 / 51 ASCG 13 / 38 MC: 1
Location: comp(1282..3831)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203571 species="Bacteria; A similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 849.0
  • Bit_score: 1663
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XYU3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 849.0
  • Bit_score: 1663
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 844.0
  • Bit_score: 1597
  • Evalue 0.0

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2550
AGCCTGTCCCACGTGAGGGCCCACTGTCTCGAGCGCGGCATGGCATGGTGGTCGATGTCCTCCTTCGCCCTGGACGCCCCCGCTACGGATGCCCTTGCTGACGACGACGTGGTCACGAGTGCCCCGCACACCGTCAACCCGCATCTGGAGGCCGTCGAGCCGTGGCGTGGAGACGTCGAGGCAGCCATCAAGGATCTGACCGGCAGACTCAATGAGGGCTGGACGGTCGTGTTGTGCGCCGAGGGTGAAGGCATCGCCAAGCGCATGACGGAGTTGCTCGGTGAACACGACGTGGCAGCCAAGATCGTTGACGAGGTCGATGCCGAGATCACCGAGCCGTGTGTCCAGGTCGTCCGGCTGCATCAGCGTCACGGTTTCGCCGCGGATTCCCTCAAACTGTTAGTGGCCTCCACCGGGGACCTTGCTGATTCCCAGGCTCCAGCCGTCAGTGGCGAGCGGCGCATGCCCCGACGCCGTCGCAATCAGATCCAGCCGCTTGAGCTCAAGTCCGGCGACCTCGTCGTCCATGAGCAGCACGGTGTGGGCCGATACGTGGAGATGGTGCAGCGCACCGTGGGTGGGGCCACCCGCGAGTATCTCGTCATCGAGTACGCCCCCTCCAAGAAGGGTCAGCCCGGCGACCGTCTCTTCGTCCCCGTCAACTCTCTGGACCAGGTGACCCGCTACGTCGGTGGTGATGCCCCCAGCCTGGACCGGATGGGTGGCACCGACTGGCGCAAGCGCAAGTCCCGAGCCCGCAAGGCAGTCCGTGAGATCGCCGCTGAACTCATCAAACTCTATGCCGCCCGGCAGGCCACCAAGGGCCACGCCTTCGGCCCCGACACCGCCTGGCAGCGGGAGCTGGAGGACGCCTTCGCCTACGTCGAGACCCCTGATCAGCTCACCACCATCGCCGACGTCAAGCACGACATGGAACAGGTCGTCCCGATGGACCGCCTGGTCTGTGGCGACGTCGGTTACGGCAAGACTGAGATCGCGGTGCGCGCTGCCTTCAAGGCCGTCCAGGACGGCAAACAGGTGGCCGTGCTGGTGCCAACTACCCTTTTGGTGCAGCAGCACTTCCAGACCTTCACCGAGCGATACGCGGGGTTCCCGGTCAAGGTCGCGGCCCTGTCTCGATTCCAGACCGATGCCGAGGCTCGCGAGACCTTGGAGGGGATCAAGCGCGGCACGGTTGACGTCGTCGTCGGCACCCATCGCCTACTGGCCAAGGAGGTCGAGTTCAAGGATCTCGGCCTGGTCATCGTCGACGAGGAACAGCGCTTCGGTGTCGAGCACAAGGAGGCCCTCAAGCGCATGAGGGTCAACGTCGACGTGCTGGCGATGAGCGCCACCCCGATCCCGCGCACCCTGGAAATGGCGGTGACCGGTATCCGTGAGATGAGCACGATCGCCACGCCGCCGGAGGAGCGTCATCCGGTGCTCACCTTCGCCGGCCCCTACGACGAGGGTCAGGTGGTTGCGGCCATCCGTCGCGAGTTGGCTCGTGAGGGTCAGGTCTTCTACATCCACAACCGGGTGCAGTCCATCGAGAAGACGGCGGCCAAACTGCGCGAGCTCGTCCCGGAGGCACGGATCGTCACCGCCCACGGCCAGATGAACGAGAAGCAGCTCGAGCAGATCATGGTGGACTTCTGGGAGCGTCGCGCCGATGTGCTGGTCTGCACCACCATCGTCGAGTCGGGTATCGACATCTCCACGGCCAACACCCTGCTCATCGATCGCGCCGACCGTATGGGCCTGTCTCAGCTGCACCAGTTGCGCGGTCGTGTTGGTCGCTCCCGGGAGCGCGGCTACGCCTACTTCCTCTACCCGGCTGACAAGCCGCTCTCCCAGACCGCCCACGATCGCCTGGCGACGATGGCCGCCCATACCGATCTGGGTGCCGGTATGGCTATCGCCATGAAGGACCTCGAGATTCGCGGCGCCGGAAACCTGTTGGGCGGCGAGCAGTCCGGTCACATCGCTGACGTCGGATTTGATCTCTACATCCGTCTGGTGGGTGACGCCGTCGCGGAGTTCCGTGGTGACGCCAGTGCCGCCGACGAACCCGAAATGCGCATCGAACTCCCGGTCGACGCCAACCTGCCAGTTGAGTACGTCGAGACCGAGCGGCTTCGTCTGGAGATGTACAAGAGGTTGGCCGAGGTGCGCAGCGACGAGGAGGTCGACGCCATCGCCGCCGAGCTCGTCGATCGCTACGGTCCGATGCCCGAGCCGGTACAGGCCCTCCTCGGGGTGGCTCGGTTCCGTCTCATGTGTCGCAGGGCAGGTATCCACGAGGTGGTCCCGTCGGGACGTAACATCCGGTTTTTCCCGGTCCATTTGCCGGAGTCGCGCGTGATGCGACTCAAGAGGCTGTATCCGGGGTCAGTGGTCAAGGAGACGGCTGGGCTTGTCATGGTTCCCAAACCGACTACCGCGCGGATCGGGGGGCAGTCTCTGGCAGGTCAGGAACTGCTCGACTGGGCTACCGGTCTCGTGGCCGGGGTGTTGGACACCAACGACGGGGCTGTGCCACGTTCTTGA
PROTEIN sequence
Length: 850
SLSHVRAHCLERGMAWWSMSSFALDAPATDALADDDVVTSAPHTVNPHLEAVEPWRGDVEAAIKDLTGRLNEGWTVVLCAEGEGIAKRMTELLGEHDVAAKIVDEVDAEITEPCVQVVRLHQRHGFAADSLKLLVASTGDLADSQAPAVSGERRMPRRRRNQIQPLELKSGDLVVHEQHGVGRYVEMVQRTVGGATREYLVIEYAPSKKGQPGDRLFVPVNSLDQVTRYVGGDAPSLDRMGGTDWRKRKSRARKAVREIAAELIKLYAARQATKGHAFGPDTAWQRELEDAFAYVETPDQLTTIADVKHDMEQVVPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFTERYAGFPVKVAALSRFQTDAEARETLEGIKRGTVDVVVGTHRLLAKEVEFKDLGLVIVDEEQRFGVEHKEALKRMRVNVDVLAMSATPIPRTLEMAVTGIREMSTIATPPEERHPVLTFAGPYDEGQVVAAIRRELAREGQVFYIHNRVQSIEKTAAKLRELVPEARIVTAHGQMNEKQLEQIMVDFWERRADVLVCTTIVESGIDISTANTLLIDRADRMGLSQLHQLRGRVGRSRERGYAYFLYPADKPLSQTAHDRLATMAAHTDLGAGMAIAMKDLEIRGAGNLLGGEQSGHIADVGFDLYIRLVGDAVAEFRGDASAADEPEMRIELPVDANLPVEYVETERLRLEMYKRLAEVRSDEEVDAIAAELVDRYGPMPEPVQALLGVARFRLMCRRAGIHEVVPSGRNIRFFPVHLPESRVMRLKRLYPGSVVKETAGLVMVPKPTTARIGGQSLAGQELLDWATGLVAGVLDTNDGAVPRS*