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NECEvent2014_8_2_scaffold_1435_4

Organism: NECEvent2014_8_2_Clostridium_perfringens_28_19

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4110..4433)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline efflux protein n=7 Tax=Bacteria RepID=H7D056_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 107.0
  • Bit_score: 211
  • Evalue 5.10e-52
TetA {ECO:0000313|EMBL:EDT14619.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 107.0
  • Bit_score: 211
  • Evalue 7.10e-52
major facilitator superfamily similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 190
  • Evalue 3.40e-46

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 324
TTTAGTTTAATGTTAATAGCTTATTTGGCAACAAATACCTTTAGAATTATAAATGAACCTATATTCAGTGCGTGGTTAAATGGGCATATAGATGATAACTCTAGAGCTACTGTACTTTCTATAAATGGACAAATGAATTCCTTAGGTCAAATTTTAGGTGGACCAATTATAGGAATCATAGCTACAAATATTTCAGTAAGTATTGGTATAGCATGTACTTCGTTATTAGTAACACCGGTATTAGTGTTATATATTGTTGCTATGATAATTGATAAAAAGGTGGATGATAGAGTTGGAGGTATTGATTATGAAGAAAATAATTAA
PROTEIN sequence
Length: 108
FSLMLIAYLATNTFRIINEPIFSAWLNGHIDDNSRATVLSINGQMNSLGQILGGPIIGIIATNISVSIGIACTSLLVTPVLVLYIVAMIIDKKVDDRVGGIDYEENN*