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NECEvent2014_8_2_scaffold_1184_5

Organism: NECEvent2014_8_2_Enterobacter_cloacae-rel_56_94_partial

partial RP 12 / 55 MC: 1 BSCG 10 / 51 ASCG 8 / 38 MC: 3
Location: 3564..5504

Top 3 Functional Annotations

Value Algorithm Source
RNase E specificity factor CsrD n=2 Tax=Enterobacter cloacae RepID=V3E6P3_ENTCL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 646.0
  • Bit_score: 1272
  • Evalue 0.0
  • rbh
Regulatory protein CsrD {ECO:0000313|EMBL:KJP63189.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae compl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 646.0
  • Bit_score: 1272
  • Evalue 0.0
regulatory protein CsrD similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 646.0
  • Bit_score: 1269
  • Evalue 0.0

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Taxonomy

Enterobacter cloacae → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGCGATTAACGACGAAGTTCTCAGCTTTTATCACCTTGCTGACGGGGCTGACCATATTTGTCACGCTAATCGGCTGCTCGCTGAGCTTTTACAATGCCATCCAGGATAAGCTGGTTAACCGGGTTGAATCGGTTGCATCGGTTATCGACACTCGCCTGATTGCAACCTCCTTCCCGGCGCTTTCGCGTGAGCTGGATGAGTTAATGGTGCCTGTGGATATCGTGCAGATCGACATTAAACAGGGGAAGCAGACCGTTTTCAGCCATACCCGCCAGGGCAGCTATCGTCCTGCCGGCACGGTAGATCAGTATCGGAACGTCACGGTTAATTCACTTAAACATCCGGGTATGACAATTCATCTGATGTACCAGGATCCGATGAGCAACTATTTACGCTCGCTTATGACCACCGCGCCCTTAACCATCGCCGTTGCCTTTATCGTACTGCTGATTTTCCTCGCCGTTCGCTGGCAGCGTCGTCAACTTTCCGGCCAGGAACTGCTGGAAACACGCTCCGTGCGGATACTGAATGGCGAACGGGGTCCACAGGTGCGGGGATCGGTTTATGAATGGCCATCACGCACCAGTAGCGCCCTGGACGTGCTGCTCTCCGAAATCCAGTTTGCCAGCGATCAGCGTAGCCGTATGGACACATTGATTCGCTCTTACGCCGCGCAGGATAACAAAACGGGCCTCAACAACCGTCTCTTCTTTGATAATCAGCTGGCTACCCTTCTTGATGACCCCGAAAAGGTGGGTACGCATGGCGTGGTAATGATGATTCGCCTGCCCGACTTCGATCTGCTCCGTGATACCTGGGGTCAGCGCGTGGCGGAAGAGAACCTCTTTACGCTGATTAACCTGCTGTCCACCTTTATTATGCGCTACCCCGGCGCGTTACTGGCACGCTACCACCGCAGCGATTTTGCCGTCTTGCTGCCGCATCGCACCTTAAAGGAGTCCGAGAGTATCGCCAGCCAGCTGCTGAAAGCCGTCGATGCGCTGCCCCAGAGCAAAATGCTCGACAGAGACGATATGGTGCATATGGGCATCTGTGCCTGGCGCGGCGGTCAGTCGACGGAGCAGGTGATGGAACATGCGGAAGCGGCCACGCGTAACGCCGTATTGCAGGGGGCGAACGGCTGGGCAGTCTATGATGATACGCTGCCGGAGAAAGGGCGCGGCAACGTGCGCTGGCGAACCCTGATTGAACAGATGCTGAGCCGGGGCGGACCGCGCATCTATCAAAAACCGGCGGTCATGAAGAATGGTCATGTTCATCATCGTGAGCTGATGTGCCGTATTTTTGATGGCACTGAAGAGGTTATCTCCGCGGAATATCTGCCCATGGTGTTGCAATTCGGATTGTCCGAAGAGTATGACCGTCAGCAAATCACCCGTCTCATTCCGTTTTTATCGTACTGGCCTGAAGAAAATCTGGCTTTACAGGTGACCGTCGAATCGCTGATCCGTCCGCGTTTCCAGCGCTGGTTACGTGACACGTTAATGCAATGCGAAAAATCGCAACGCAAACGCATTATTTTTGAACTTGCAGAGGCAGATGTAGGTCAACACATCAGCCGGTTGCGCCCGGTAGTGCGTTTAATCAATGCGCTTGGGGCTCGCGTGGCGGTAACCCAGGCGGGTTTGACGCTGGTGAGCACCCGCTGGATCAAAGAGCTGGATGTTGAATTATTGAAGCTGCATCCGGGTCTGGTAAGGAATATTGAAAAACGCACGGAAAACCAGCTGCTGGTACAAAGCCTGGTGGAAGCGTGCAAAGGAACGCAAACGCAAGTATTTGCCACAGGCGTACGTTCACGTAGTGAATGGCAGATGTTGACAGAGCGCGGCGTGACGGGCGGTCAGGGGGATTTTTTTGCCGCCTCTCAGCCGCTTGACACCAATGTGAAAAAATATTTGCAAAGATACTCTGTTTGA
PROTEIN sequence
Length: 647
MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLIATSFPALSRELDELMVPVDIVQIDIKQGKQTVFSHTRQGSYRPAGTVDQYRNVTVNSLKHPGMTIHLMYQDPMSNYLRSLMTTAPLTIAVAFIVLLIFLAVRWQRRQLSGQELLETRSVRILNGERGPQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDNQLATLLDDPEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGALLARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQSTEQVMEHAEAATRNAVLQGANGWAVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAVMKNGHVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLIPFLSYWPEENLALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALGARVAVTQAGLTLVSTRWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQVFATGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV*