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NECEvent2014_8_2_scaffold_3449_3

Organism: NECEvent2014_8_2_Enterobacter_cloacae-rel_56_233_partial

partial RP 20 / 55 MC: 4 BSCG 16 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 814..2199

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 489.0
  • Bit_score: 812
  • Evalue 3.00e-232
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 489.0
  • Bit_score: 810
  • Evalue 3.00e-232
DNA-directed RNA polymerase subunit beta n=6 Tax=Dickeya RepID=U6ZPH6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 489.0
  • Bit_score: 811
  • Evalue 4.80e-232

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Taxonomy

Dickeya solani → Dickeya → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
GTGACTTATTCTGCACCGCTGCGCGTAAAACTGCGTCTGGTGATCTACGAGCGCGAAGCGCCGGAAGGCACCGTTAAAGACATCAAAGAACAAGAAGTCTACATGGGCGAAATCCCGCTCATGACCGACAACGGTACCTTTGTTATCAACGGTACCGAGCGTGTTATCGTTTCTCAGCTGCACCGTAGCCCGGGCGTCTTCTTTGACAGTGACAAAGGTAAGACCCACTCCTCCGGTAAGGTCCTGTATAACGCACGTATCATCCCTTACCGCGGTTCCTGGCTGGACTTCGAATTCGACCCGAAAGACAACCTGTTCGTTCGTATCGACCGTCGTCGTAAACTGCCGGCAACCATCATTCTGCGCGCGCTGAATTACACCACTGAGCAGATCCTTGACCTGTTCTTCGAGAAAGTGGTCTTTGAAATTCGCGACAACAAGCTGCAGATGGAGCTGGTACCGGAGCGTCTGCGCGGTGAAACCGCCTCCTTCGATATCGAAGCCAACGGTAAAGTGTACGTTGAGAAAGGCCGTCGTATTACTGCGCGCCACATTCGCCAGCTGGAAAAAGACGATATCAAACATATCGAAGTTCCGGTTGAGTACATCGCGGGTAAAGTTGCTTCTAAAGACTACATCGACGAAGCGACCGGCGAACTGATCTGCCCGGCGAACATGGAGCTGAGCCTGGATCTGCTGGCTAAACTGAGCCAGTCCGGCCACAAGCGTATCGAAACGCTGTTCACCAACGATCTGGACCACGGTCCGTACATTTCTGAAACGGTACGCGTCGACCCGACCAACGATCGTCTGAGCGCGCTGGTAGAAATCTACCGCATGATGCGCCCTGGTGAGCCGCCGACTCGCGAAGCGGCTGAAAGCCTGTTTGAGAACCTGTTCTTCTCCGAAGACCGCTACGATCTGTCCGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGACGAAATCGAAGGTTCCGGTGACCACCTCGGCAACCGTCGTATCCGTTCCGTAGGCGAAATGGCGGAAAACCAGTTCCGCGTTGGCCTGGTACGTGTAGAGCGTGCGGTGAAAGAGCGTCTGTCTCTGGGCGATCTGGATACCCTGATGCCTCAGGATATGATTAACGCGAAGCCGATTTCTGCGGCAGTGAAAGAGTTCTTCGGTTCCAGCCAGCTGTCTCAGTTCATGGACCAGAACAACCCGCTGTCTGAGATCACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGCGCAGGCTTTGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACGCCTGAAGGTCCAAACATCGGTCTGATCAACTCCCTGTCCGTGTAC
PROTEIN sequence
Length: 462
VTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVASKDYIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVY