ggKbase home page

13_1_20cm_3_scaffold_422937_2

Organism: 13_1_20cm_3_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(743..1423)

Top 3 Functional Annotations

Value Algorithm Source
TRAP C4-dicarboxylate transport system permease DctM Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 224.0
  • Bit_score: 415
  • Evalue 6.90e-113
Putative TRAP-type C4-dicarboxylate transport system, large permease component id=4900377 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 391
  • Evalue 4.40e-106
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 166.0
  • Bit_score: 286
  • Evalue 5.70e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
TACCAGAAAGCGGTCTGGTGGTGGAGCCTCGTCGGCTTCGTCATCGGCATCGCGCTGGGATGGTACGAAGGCGAGGACTGGGCCTCGCTGCTCGTGGCCGGCTCCATCGCCGGCACGCTCGTCGGGACGGTGGTGCCGGGCCTGTGGTACCTGCGGGTCTCGCCCGAGCTGCGGCGCAACATGAAGGAGTCGACGTTCCTGACCGCGAAGACGACGGCGATGGTCTGCTGGCTCTTCGTCGGCTCCGCGCTCTTCTCCGCCGTATTCGCGCTGCACGGCGGCCAGTCGCTGATCGAGCGCTGGGTGCTCGGCATGAACCTGTCGCCACTCGGGTTCCTGGTGATCGCGCAGCTGATCATCTTCCTCCTGGGCTGGCCGCTCGAGTGGACGGAGATCATCGTGATCTTCTGCCCGATCTTCATCCCCTTGCTCTCGCACTTCCACATCGATCCCATCCTCTTCGGTACCATGGTCGCGGTGAACCTGCAGGCGGCGTTCCTCTCTCCCCCGGTTGCGATGTCCGCGTTCTACTTGAAGGGAGTGGCGCCGAAGCACGTCACGCTGAACCAGATCTTCGCCGGGATGATGCCGTACATGGTGATCGTCCTCATCTGCCTGGTGTTCATGTACATCTGGCCGGGGATGACGCTCTGGCTTCCGGAATTCCTGTACGACATGTAG
PROTEIN sequence
Length: 227
YQKAVWWWSLVGFVIGIALGWYEGEDWASLLVAGSIAGTLVGTVVPGLWYLRVSPELRRNMKESTFLTAKTTAMVCWLFVGSALFSAVFALHGGQSLIERWVLGMNLSPLGFLVIAQLIIFLLGWPLEWTEIIVIFCPIFIPLLSHFHIDPILFGTMVAVNLQAAFLSPPVAMSAFYLKGVAPKHVTLNQIFAGMMPYMVIVLICLVFMYIWPGMTLWLPEFLYDM*