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NECEvent2014_10_1_scaffold_3_262

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(283759..284745)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 transcriptional regulatory protein n=23 Tax=Escherichia coli RepID=F4SU06_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 328.0
  • Bit_score: 645
  • Evalue 2.50e-182
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 328.0
  • Bit_score: 645
  • Evalue 7.00e-183
  • rbh
Sigma-54 transcriptional regulatory protein {ECO:0000313|EMBL:EGI17688.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 328.0
  • Bit_score: 645
  • Evalue 3.50e-182

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCCTTTAACGTACCGGTGCTCATTCAGGGCGAAACCGGCGCGGGGAAAGAGTGCGTGGCGAAATATATTCACACCGTAGCCTTTGGTGAAAATGATAACGCGCCCTATATCGGCGTGAACTGTGCGGCGATCCCGGAAAATATGCTGGAAGCGACCTTATTTGGCTACGACAAAGGCGCATTTACCGGCGCAATTGCCAGCGTGCCAGGAAAAATGGAACTGGCTAATAACGGCACCTTATTGCTCGATGAAATTGGCGATATGCCGCTGGCATTACAGGCCAAAATATTACGCGTATTGCAGGAACAGCAGGTTGAGCGATTAGGCAGCAATAGACAAATCAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAATCTGGAACAGGACGTGGCTGCTGGACGTTTTCGTGAAGATCTTTATTATCGTCTGGCGGTTATTCCTATAACCATGCCGCCACTGCGTGAACGTCTGAACGATATTATTCCGCTGGCAGAGTCGTTTATTAAAAAATATGCCACGGTGCTGGTGAAAAATATCACCCTGTCCGAATCCACACGCCGGGCGCTACTTAATTACCGCTGGCCCGGAAATGTTCGCCAACTGGAAAACGCCATTCAGAGAGGAATGATCTTAAACCGCGACGGCGTGATTTACCCGGATGCCTTAGGCCTGCCGGAAACTGACATTGCCGACCACAGCGAACTGCAATGGCCTGTTCAGCCCGCCGTCCACATTGCCGAAACCCGCGATTTAGGCCAGCACGGACGAAGTGCGCAGTATCAATATATCGCCGACCTGATGCGTAAATATCAGGGCAACCGCAGCAAAATCGCCGACCTGTTAGGCATTACCCCGCGCGCACTGCGCTATCGGCTGGCCTCCATGCGCAAGCAAGGTATCGAAGTTTTCTCCTGA
PROTEIN sequence
Length: 329
MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENDNAPYIGVNCAAIPENMLEATLFGYDKGAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQDVAAGRFREDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYATVLVKNITLSESTRRALLNYRWPGNVRQLENAIQRGMILNRDGVIYPDALGLPETDIADHSELQWPVQPAVHIAETRDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMRKQGIEVFS*