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NECEvent2014_10_1_scaffold_13_1

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(139..438)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1431 Tax=Enterobacteriaceae RepID=IHFA_ECO24 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 3.20e-48
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 8.90e-49
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1444053 species="Bacteria; Proteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 4.40e-48

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCGCTTACAAAAGCTGAAATGTCAGAATATCTGTTTGATAAGCTTGGGCTTAGCAAGCGGGATGCCAAAGAACTGGTTGAACTGTTTTTCGAAGAGATCCGTCGCGCTCTGGAAAACGGCGAACAGGTGAAACTCTCTGGTTTTGGTAACTTCGATCTGCGTGATAAGAATCAACGCCCGGGACGTAACCCGAAAACGGGCGAGGATATTCCCATTACAGCACGGCGCGTGGTGACCTTCAGACCCGGGCAGAAGTTAAAAAGCCGGGTCGAAAACGCTTCGCCCAAAGACGAGTAA
PROTEIN sequence
Length: 100
MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE*