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NECEvent2014_10_1_scaffold_16_20

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 25584..25919

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein RtcR n=21 Tax=Escherichia coli RepID=Q0TC46_ECOL5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 220
  • Evalue 6.70e-55
sigma 54-dependent transcriptional regulator of rtcBA expression similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 220
  • Evalue 1.90e-55
Sigma 54-dependent transcriptional regulator of rtcBA expression {ECO:0000313|EMBL:CAR10219.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 220
  • Evalue 9.30e-55

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGCCACCTTTGCCACTAGCGGACGCATCACACTGGATACAGTGGAAGATGAGATCAACCGTCTGCGCTATAACTGGCAGGAGAGTCGCCCCTCCACGCTTACGGCGTTGCTGGGCGCAGAGGCAGAAAACATCGATCTCTTCGACCGTATGCAACTGGAACACGTTATCGCTATCTGCCGCCAGGCAAAGTCGCTTTCTGCTGCCGGACGTGAACTGTTTGACATTTCGCGCCAGGGTAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACATGGGAAGCAATGCAGGATCAGCACAGCTCCAGTTGA
PROTEIN sequence
Length: 112
MATFATSGRITLDTVEDEINRLRYNWQESRPSTLTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRELFDISRQGKASVNDADRLRKYLARFGLTWEAMQDQHSSS*