ggKbase home page

NECEvent2014_10_1_scaffold_105_4

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1596..2456)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=2 Tax=Lactobacillus gasseri RepID=D7V6E4_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 286.0
  • Bit_score: 574
  • Evalue 4.70e-161
  • rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEJ60535.1}; TaxID=525330 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johns similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 286.0
  • Bit_score: 568
  • Evalue 6.10e-159
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 286.0
  • Bit_score: 566
  • Evalue 4.70e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus johnsonii → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 861
ATGTATGGTCATGAATTCAAAGAATTACGCTTAGAACAAGGTATTACGCAAAAAGAAGCTTGCAGCGGAATCTGTTCTGAATCAAAACTATCACGCTGGGAAAATGATCAAGTCGAGGTTGAATTTAGTACGGCAATGAAATTACTAAATAGAATTCACATTACTAGTCATGAATTTATGGGTTGGTCCAAATTTTCACCACGACCCGAAATAGATCCTGAGCTTTCTGAAGCTACTGAAAAAGAAAATATTCCGTTTCTCAAACGAGTTACACAAAAACAACTAACTAAGTATCATAAAAATCATAATAAGTTTGACTTATTTATGGCTGCTAATCTATGTAATCAACTTTTTATCATCGAACATAAAAATTACTTGCCTCCTATTGACCAAAAAAAGCTTTTTGCAATTTTTTCAAAAGTCAATTTATGGAGTCAATACTATATTTCAGCGTTTGGTGCATCAATTTTTCTATTCAATCCTAAGCAAATTTATGGTAGTTCAATGCAAATCATTCGTAATATTGACCGTCTTAAAGAAGCTGAAACTAGTTTTAACTTAGAAATCATTATGGGAAGTTTATCAGATGGCATTTTACGGCTGATTTCACTTAATGAATTGTCTTATGCTCAGAAATTAGTCAAAGAACTTAAAAAAATCGAATTACCACAATATTTAATGTTTTTTACTCTAACCTTGACTTATTTGCAAAAGGCAATTGATTACATGAAAAATGGTGATGACAAACCAATACTTACATTAATTTCAGAAGTTTTAGATTTAGGGTGCAGTGTGCAAGCCACCACCTACCTAGATATGTTTAAGTATTTAAAAGCTCAGCGAAAAAAATACAATTTTTAA
PROTEIN sequence
Length: 287
MYGHEFKELRLEQGITQKEACSGICSESKLSRWENDQVEVEFSTAMKLLNRIHITSHEFMGWSKFSPRPEIDPELSEATEKENIPFLKRVTQKQLTKYHKNHNKFDLFMAANLCNQLFIIEHKNYLPPIDQKKLFAIFSKVNLWSQYYISAFGASIFLFNPKQIYGSSMQIIRNIDRLKEAETSFNLEIIMGSLSDGILRLISLNELSYAQKLVKELKKIELPQYLMFFTLTLTYLQKAIDYMKNGDDKPILTLISEVLDLGCSVQATTYLDMFKYLKAQRKKYNF*