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NECEvent2014_10_1_scaffold_106_23

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(16494..18833)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 779.0
  • Bit_score: 1579
  • Evalue 0.0
Ribonuclease R n=1 Tax=Lactobacillus gasseri K7 RepID=S1S1A9_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 779.0
  • Bit_score: 1587
  • Evalue 0.0
  • rbh
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 779.0
  • Bit_score: 1579
  • Evalue 0.0
  • rbh

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2340
ATGACACAAAATGAACGAGTTTTAGCTGATGTTTATGAGACATTCAGACATAATCCTCAAGAGCAATACGATGTAGATCAACTTGAAAATGATCTCAGCCGTAATCAAAGACTAAATTTTCCAGATTTAGTTAAAGCTTTAACTTTTTTAGAGCACAGTAAAAAAATTGTAACTGATGGTCAAGGAAAATATCAGTTGAATCAATTGAATACTGTTGCTGAAGGTACATTTAAAGCAAATGATAAAGGATTTGGTTTTGTTAAATTTGATGATGAAAGTATGGAAGATGCTTTCATTGATAAGCACAATACCAAGTTTGCAATTGATGGAGACCATGTTAAAGTAAAGATCATCGCAGGTGCAAATCCATGGAATGGCAGAGGACCCGAGGGTAAAATTGAGGAAATTACTGAACGTGGAGTTGAAACTTTAGTTGGTGAATTTCATCCGTATGCTGATGAAGTAGTAAAATCAAGTGGCTTTTACGGTTATGTTGTTAGTGAAAATCGTAAGTTAAAGAAATATAAGATTAATATCACCGATAACGGTGTTAAGCCACAAATGGGTGATATGGTAAAAATTTCTATTACCAAATATCCTAACGAAGATCAACCTGATGAAATGCAAGGTGTAGCTCTTTTAACTATTGGTAATAAGAATGATCCTGGTGTTGATATCATGTCAATTGTAGTTGACAATGATATTCGAACTGATTGGCCTGAAGATGCTATGGATCAGGCAAATAATATTCCAGATCATGTAACAGAGGAAGAAAAAGCAAAACGTGTTGATATTACTGATCAACCTGCTGTAACAATTGATGGGGACGATTCGAAAGACTTTGATGATGCTGTAGTAGTTTGGAAGCTTCCTAATGGTAATTATCACCTAGGTGTACATATTGCTGATGTGTCCCATTATGTAAAAGAAGGAAGTCCTTTAGATAAGGAAGCTTTTGCTCGTGGTAATAGTACTTACTTAGTTGATCGTGTTATTCCAATGCTTCCATTCAGATTATCAAATGGTATTTGTTCGCTTAATGAAGGCGTTGAACGTTTGGTTCTTTCATGTGATATGGAGATTACACCAGAAGGTAAGCGTGTTGGTTATAGAATATATCCATCAGTTATGAAATCACATGGTCGTTTAACATATAACAACGTTAATAAAGTTCTTGATCCAAATAATCATGAAAAACTAGAACAAAAATATAAAGACGTTGCTCCAATGCTTCATGATATGGCTGACTTACACAGTATTTTATATAAGCAACGGCATCAACGCGGTGCAATTGATTTCGAAGAACCAGAAGCTAAGATTATTGTTGATGATAAAGGTAAGCCAACTGATATTGTTCTTCATGAACGTGGTACTGCTGAAAAAATGATTGAATCGCTTATGTTAATGGCGAATGAAACAGTTGCTGAAGATTATTACAAGAAGCATGTTCCTTTTCTTTACCGTGTTCACGAAACTCCAGATCAAGAAAAGATGCAATCATTCTTTGAATTTGTAAGTGCATTTGGCTTAAATGTAAAAGCTGATCCAAATGATGTAAAACCAAAAGATTTACAGAAGGTGGTAGCTAAGACTGAAGGTACACCTGAAGAAGCAGTTGTGCAAATGATGATGCTTCGTAGTTTGAAACAAGCACATTATTCTCCAGAACCACTTGGTCACTTCGGTTTGGCAGCTAAATACTACACTCACTTTACTTCTCCAATTCGTCGTTATTCTGACTTAATGGTCCACCGAATGATTCATGAATATGCTGATAAAAAGATGGATAAGGATGTCCAAAAGCATTTCAAGTCACAGCTTCCTGATGTTGCTGAACAAACTTCAACACAAGAAAGAAAGTCAATTGATACTGAACGTGGTGTAAATGATTTGAAGATGACGGAATTCATGGCTGATAAAGTTGGTCAAACTTTTGATGCTATTGTTTCATCAGTAACAAGTTTTGGGATGTTTATTCAATTGCCAAATACTGTTGAAGGTTTGATTCATATTTCTAACTTAAACGATGATTATTACAACTTTGATGAAAAGTCATTGACTTTAACAGGTCGCAATTCTCACAAGCAATTTAAGATTGGAATGCCAATTAAGGTTAAGTTAATCAATGCAGATGTTGAGCAACATCAATTAGACTTTGAAATTTATGATCCAAATGCCAAAAAACGTCCGCAAAGAGGTTATAGTCGCGGTAAGCGTAGCTTTAATAAGGGACATAGAAATAATAATGGTAAGAATAATAAATCTTTCCATGTAAATAATGGTCATAATTTTAAGATTCGCCATCGTCAGAATACAACTGTTAAAACTAATAAAAAGTAA
PROTEIN sequence
Length: 780
MTQNERVLADVYETFRHNPQEQYDVDQLENDLSRNQRLNFPDLVKALTFLEHSKKIVTDGQGKYQLNQLNTVAEGTFKANDKGFGFVKFDDESMEDAFIDKHNTKFAIDGDHVKVKIIAGANPWNGRGPEGKIEEITERGVETLVGEFHPYADEVVKSSGFYGYVVSENRKLKKYKINITDNGVKPQMGDMVKISITKYPNEDQPDEMQGVALLTIGNKNDPGVDIMSIVVDNDIRTDWPEDAMDQANNIPDHVTEEEKAKRVDITDQPAVTIDGDDSKDFDDAVVVWKLPNGNYHLGVHIADVSHYVKEGSPLDKEAFARGNSTYLVDRVIPMLPFRLSNGICSLNEGVERLVLSCDMEITPEGKRVGYRIYPSVMKSHGRLTYNNVNKVLDPNNHEKLEQKYKDVAPMLHDMADLHSILYKQRHQRGAIDFEEPEAKIIVDDKGKPTDIVLHERGTAEKMIESLMLMANETVAEDYYKKHVPFLYRVHETPDQEKMQSFFEFVSAFGLNVKADPNDVKPKDLQKVVAKTEGTPEEAVVQMMMLRSLKQAHYSPEPLGHFGLAAKYYTHFTSPIRRYSDLMVHRMIHEYADKKMDKDVQKHFKSQLPDVAEQTSTQERKSIDTERGVNDLKMTEFMADKVGQTFDAIVSSVTSFGMFIQLPNTVEGLIHISNLNDDYYNFDEKSLTLTGRNSHKQFKIGMPIKVKLINADVEQHQLDFEIYDPNAKKRPQRGYSRGKRSFNKGHRNNNGKNNKSFHVNNGHNFKIRHRQNTTVKTNKK*