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NECEvent2014_10_1_scaffold_149_13

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(14920..15759)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Lactobacillus gasseri K7 RepID=S1RW65_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 532
  • Evalue 2.00e-148
  • rbh
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 279.0
  • Bit_score: 527
  • Evalue 2.40e-147
  • rbh
RpiR family transcriptional regulator {ECO:0000313|EMBL:AJC07436.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gas similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 279.0
  • Bit_score: 527
  • Evalue 1.20e-146

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 840
GTGGAAAATATTATTGATAAAATTTATGCACAAATGAGTAGCATGTCTCCTTCTGATCAAAAGGTAGGTAGAACAATTCTCAAGAATCCAGCAACGATTATAAACATTACAATTTCTCAATTAGCTAAAAGAGCAGGTGTAAGTGATGCATCTATTACAAGATTTTGTCGTAATTTATCCTTATCTGGTTTTCATGAGCTAAAAATTTTATTAGCACAATGCATTGGTCAAAAAGAAAGTGAATCGTTAAAGAAACTACCAAAAGACGATATGCAGGCAGCGCTAGGAGAGATAGAAAAAAATAAAGTTGGTGAAATTCACGCTACTTTAAATCAAATTCCAACTGATGAATTAGAAAAGATTCTTTCTATTATTGAAGCAAGCCGAATCATCCAGATTAGCGCAGAAGGTGATACTTATCCAGTAGCTGCCGATGCTGTCTACAAATTTAATCAAATCGGCTTATTGTCATTTGCTTCTGGTGGAAATGTTGAAACAGCTGATGCGCAAACAATGAATTTAGGCAAAAAGGATTGTCTAATTGTTATTTCAAATTCTGGGGAATCAGCAGCTTTGTTAAAGGAAATAAAGTTAGCACACAAAAATAAGCTAAAGGTTATTAGTATCACTAATAATCCTGCTTCTCCAATTGCTTTAGCGAGTGACTATCATTTAAAGACTGGTGTAAGACAGACAATTTTGCAAAACCAATATTATTTTTCTCGTGTAGCAGCTTTTACGATTACTGAAGCTCTATTTTTATTACTTATAAAAAGTAACGAGAAGCGAATTGAGAATATTAAACAGCATGAACAAATTATTTCTAGTCAAAAAATCTAA
PROTEIN sequence
Length: 280
VENIIDKIYAQMSSMSPSDQKVGRTILKNPATIINITISQLAKRAGVSDASITRFCRNLSLSGFHELKILLAQCIGQKESESLKKLPKDDMQAALGEIEKNKVGEIHATLNQIPTDELEKILSIIEASRIIQISAEGDTYPVAADAVYKFNQIGLLSFASGGNVETADAQTMNLGKKDCLIVISNSGESAALLKEIKLAHKNKLKVISITNNPASPIALASDYHLKTGVRQTILQNQYYFSRVAAFTITEALFLLLIKSNEKRIENIKQHEQIISSQKI*