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NECEvent2014_10_1_scaffold_150_5

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 5136..6404

Top 3 Functional Annotations

Value Algorithm Source
Superfamily II DNA/RNA helicase required for DNA uptake (Late competence protein) n=5 Tax=Lactobacillus gasseri RepID=Q042C6_LACGA similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 422.0
  • Bit_score: 799
  • Evalue 1.30e-228
  • rbh
competence protein ComF similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 846
  • Evalue 3.50e-243
  • rbh
Competence protein ComF {ECO:0000313|EMBL:AJC07592.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 846
  • Evalue 1.70e-242

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1269
ATGACCGAATTAAAAGGACGCCAATGGATATCTGATCAGAATAACCATAACATAAACGGCGAAACTACAAAAGTTCCTGCAATGATAAATGGAATTTGTCAGCGATGTAACACCAAAGCAGTATCGAAATTACCAGATGGGCGACGGTATTGCCGAGAGTGTATTGGGCTAGGAAGAATAACAGAAGGGGATGAGTTAGAACGAAACGTTGAGAATGTCAATTATCCTAAAGTACTTATGCCTTTAAGCTGGAGTGGCACGCTAACTGAACAGCAAGAATTGATCTCCAAGGAATTAGTGAATTCTTTTAAAGATAGGCGTAATCATCTGATTCATGCAGTAACTGGGGCTGGTAAGACTGAAATGCTATTTAAGGTAGTAGAAGAAGTTTTAAAAGGCGGTTTTCGAATAGCAATTGCTACTCCAAGAATTGACGTAGTTGATGAATTGTTTCCACGTTTTCAAGCGGCTTTTGAAAAAGTAGAAATTGGCAAATACCATGGACGTGAACATCATGAAATAAGTGATGAACAATTTGTTATTTGTACAACGCACCAACTTTTAAAGTTTTATCATGCGTTTGACTTAATTGTAATTGATGAGGTAGATTCTTTTCCTTTTTATGAAAATAAGATGTTGCATTTTGCGGCAGAAAACGCGGTAAAGGAAGCAGGGTGTACTTTTTTTCTAACAGCAACGCCAGACTCAAAGTTATTAAGGCAAGCGAAAAATAAAACAATAAATTATTCTTTACTTAAGAGGCGATTTCATCAAGGTTTGTTACCAGTCCCCAAAGAAAAATATTTTTTTAAGTCTTTTATTTCAAATAAGGGAAAAGTTCATCCGGTTTTGATTAAACAAATTAAGCAAATTCTTGATATGAAAAAGCCACTTTTAATATTTGTTCCTCGAATTAAAGAATTACCGGCTTATGAAGAATATATAAGCTCGATTTTTAAAGCAAGTAAGATTGTTAGTGTGTATGCAGGTGATAAGGATCGACAGGCAAAAGTTGCTAGCTTTCGCAAGCGAGAGATAGATATTTTACTGACGACAACAATTTTAGAACGAGGAGTAACTTTTAAGCATGTTCAAGTAATTGTGATTGCTGCCGATGATCCAATTTATAATACGCCAAGCTTAGTTCAGATTGCAGGAAGAGTTGGGAGAAGTGCTGATGATCGAGATGGATTAGTTTTGTTTTGTTATCACAAATATACTAAAAGTATCCGAGAAGCAATGAGACAGATTAGGATGATGAATAGATGA
PROTEIN sequence
Length: 423
MTELKGRQWISDQNNHNINGETTKVPAMINGICQRCNTKAVSKLPDGRRYCRECIGLGRITEGDELERNVENVNYPKVLMPLSWSGTLTEQQELISKELVNSFKDRRNHLIHAVTGAGKTEMLFKVVEEVLKGGFRIAIATPRIDVVDELFPRFQAAFEKVEIGKYHGREHHEISDEQFVICTTHQLLKFYHAFDLIVIDEVDSFPFYENKMLHFAAENAVKEAGCTFFLTATPDSKLLRQAKNKTINYSLLKRRFHQGLLPVPKEKYFFKSFISNKGKVHPVLIKQIKQILDMKKPLLIFVPRIKELPAYEEYISSIFKASKIVSVYAGDKDRQAKVASFRKREIDILLTTTILERGVTFKHVQVIVIAADDPIYNTPSLVQIAGRVGRSADDRDGLVLFCYHKYTKSIREAMRQIRMMNR*