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NECEvent2014_10_1_scaffold_171_17

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 12881..13309

Top 3 Functional Annotations

Value Algorithm Source
16S RNA G1207 methylase RsmC n=1 Tax=Lactobacillus gasseri K7 RepID=S1S4Z4_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 143.0
  • Bit_score: 295
  • Evalue 3.60e-77
16S RNA G1207 methylase RsmC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 143.0
  • Bit_score: 295
  • Evalue 1.00e-77
16S RNA G1207 methylase RsmC {ECO:0000313|EMBL:AJC08442.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 1309 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 143.0
  • Bit_score: 295
  • Evalue 5.00e-77

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 429
ATGACAAAAAAGAATCAAATGTATTTTGCGGCTAATCCGGATGCTAAACATGATGAACATTTAGTTGATTATCATATTGACGATATTGATTTGAAATTTACAACTGATGCAGGCGTATTTTCAAAGCTAAGAATTGACTATGGTTCTGGTGTATTAATCAAAACCATGAAAGACTTAACCTTTCCAAAAGCTGGGATTTTAGACGTTGGAACAGGGTATGGTCCAATGGGCTTATTTGCAGCTAAATTTTGGCCAGAGCAAGAAGTTGATATGGTCGACGTAAATGAACGAGCTCTTGATTTAGCTAGGAGAAATGCAAAGTTTAATCAAATTAACAATGTTAATATCTACCAATCAGATATTTATGAACAAGTGGATAAAAAGTATGGGCTAGTGATTACTAATCCACCAATTCGGGCTGGAAAGAAA
PROTEIN sequence
Length: 143
MTKKNQMYFAANPDAKHDEHLVDYHIDDIDLKFTTDAGVFSKLRIDYGSGVLIKTMKDLTFPKAGILDVGTGYGPMGLFAAKFWPEQEVDMVDVNERALDLARRNAKFNQINNVNIYQSDIYEQVDKKYGLVITNPPIRAGKK