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NECEvent2014_10_1_scaffold_304_7

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(2372..2656)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E707_LACJH similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 86.0
  • Bit_score: 131
  • Evalue 3.50e-28
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEJ59375.1}; TaxID=525330 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johns similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 86.0
  • Bit_score: 131
  • Evalue 4.80e-28
scrB; Transcriptional regulator, putative similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 84.0
  • Bit_score: 87
  • Evalue 1.60e-15

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Taxonomy

Lactobacillus johnsonii → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 285
ATGAAAAGAGGTGAAAAAATGGGAGAACTAAAACTAGACTTAAAAAGACTGCGAGCCGAGCGAATAGCAAAAGGGTTAGATCAAGCTGAGTTTGCTCATAAATTAGGCATGAGTAGAAGCAGTTATAGTAAACGTGAAAATGGATTAGTTAACATCTCTATAAGTGAACTGGCTAGGATGATGTCGATATTGGGATTTAATAAAGATAATCTTTCAATATTTTTTACCCAAAATGTTCCCATTGGGGAACGCAAAAAGCTAAGAGGAGATAAAAAAAGTGAATAA
PROTEIN sequence
Length: 95
MKRGEKMGELKLDLKRLRAERIAKGLDQAEFAHKLGMSRSSYSKRENGLVNISISELARMMSILGFNKDNLSIFFTQNVPIGERKKLRGDKKSE*