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NECEvent2014_10_1_scaffold_304_8

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 2790..3491

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Lactobacillus mucosae LM1 RepID=H3RPU0_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 233.0
  • Bit_score: 240
  • Evalue 1.30e-60
XRE family transcriptional regulator {ECO:0000313|EMBL:AJT50114.1}; TaxID=1130798 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus muco similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 233.0
  • Bit_score: 240
  • Evalue 1.80e-60
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 233.0
  • Bit_score: 230
  • Evalue 5.00e-58

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Taxonomy

Lactobacillus mucosae → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGAAACAATGATGAAATTGTTGCATATGTCAATGACCTTAGAAAATCACAAAATATGTCATTAAATGAATTAGCACGTGCAACTGGATTAGCTAAATCTAGTTTATCCAGATATTTTAATAAGACCCGAGACTTTCCAGTTAATAAGGTTCATCTATTTGCAAAAGCATTACATACTTCTTCCGAAGATATATTAGGGTTTAGGACCGATGGATCTGCAAATTACACTTCTTCTGGGGATGAATGCTCAATTAATGATGATATGAGTAGTTATGAAATTAAAAAGCCTAAAAATATGGTAGAAACTACTACAAAACATGTCCCTCTTATAGGAGAGATTGCGTGCGGTGATCCAATCACTGCTGAAGAGAACATTGAAGAGTATATAACTCACGTCTTTCCTAAGGGACAAGTACCTTCTGGAGAACTAATTGATCTAAGAGCAAAAGGTCGCTCAATGGAACCTACTATTCCAGATGGTTCTATAGTTACTATCAGATTACAGCCAGAGGTTGAAGATGGCGAAATTGCTGCCGTTTTAGTTAATGGAGATACTGAAGCAACACTTAAGCGCGTTAAACACATTGACGGATTAGTTATGCTGAAACCAGATAATGATGCTTATGATCCAATCATTATCACACCCACCAATCCCGCAAGGATTATAGGAAAAGCAATTCAGTTTACTAGTAAGCTGTAA
PROTEIN sequence
Length: 234
MRNNDEIVAYVNDLRKSQNMSLNELARATGLAKSSLSRYFNKTRDFPVNKVHLFAKALHTSSEDILGFRTDGSANYTSSGDECSINDDMSSYEIKKPKNMVETTTKHVPLIGEIACGDPITAEENIEEYITHVFPKGQVPSGELIDLRAKGRSMEPTIPDGSIVTIRLQPEVEDGEIAAVLVNGDTEATLKRVKHIDGLVMLKPDNDAYDPIIITPTNPARIIGKAIQFTSKL*