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DORA_ECA_217_4

Organism: Escherichia coli - Strain A

near complete RP 53 / 55 MC: 7 BSCG 51 / 51 MC: 7 ASCG 13 / 38 MC: 1
Location: comp(4113..5072)

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein GspC {ECO:0000313|EMBL:ETJ27887.1}; Flags: Fragment;; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 624
  • Evalue 6.20e-176
yghF; putative type II secretion protein GspC KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 319.0
  • Bit_score: 617
  • Evalue 2.00e-174
  • rbh
General secretion pathway protein GspC similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 563
  • Evalue 0.0

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
TTGGCGCGGGTTGTTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACAAAAATTCGTCACACTCTTAACCAGAGACAATCTCTTAATACAGACAAAGAGCATCTGCGAAAAATTGTACGCGCGATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAGTGGCGCATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATATACGGCGGTTTCCCCATCGGCGAATAAACCGCCCCGTGCAGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCAGCCAGCAAAACTGGTTTGGCAAATATCAGCCTGTCGCCGTGCCGGTAAAACAACCTGAACCTGCGCCTGTGGCAGAAACACGTCTTAATGTGGTGCTGCGCGGGATCGCCTTTGGTACCAGACCTGGCGCGGTTATTGAAGAAGGCGGCAAACAGCAGGTCTATTTGCAGGGGGAACGGCTTGGTTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGCTATCAGGGAAAAATAGAGCGCCTGAGCCTGGCAGAAGAGGAGCGTTCCACCGTAGCCGTGACCAACAAAAAAGCCATCAGTGACGAAGCAAAGCAAGCTGTTGCTGAGCCTGCTGCCAGTGCGCCAGTTGAGATCCCGACTGCTGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGTGAAGCCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGTTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCCACGACATTTCCATCGCGCTGCGCTAA
PROTEIN sequence
Length: 320
LARVVFRDARIYLIQWLTKIRHTLNQRQSLNTDKEHLRKIVRAMFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKPPRADAKTFDKNDVQLISQQNWFGKYQPVAVPVKQPEPAPVAETRLNVVLRGIAFGTRPGAVIEEGGKQQVYLQGERLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAISDEAKQAVAEPAASAPVEIPTAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR*