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NECEvent2014_5_6_scaffold_2650_3

Organism: NECEvent2014_5_6_Clostridium_perfringens_30_4_partial

partial RP 23 / 55 BSCG 20 / 51 ASCG 8 / 38
Location: 875..1387

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=8 Tax=Clostridium perfringens RepID=RL4_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 336
  • Evalue 1.30e-89
  • rbh
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 336
  • Evalue 3.60e-90
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 336
  • Evalue 1.80e-89

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 513
ATGCCTAAAGTAGGTTTATTTAATAAAGAAGGACAACAAGTTGGAGATATCCAATTAAATGAGCAAGTATTCGGAGTAGAAGTAAACAAATATGCTTTACACCAAGTAGTAGTAGCTCAATTAGCTAACAAGAGACAAGGTACTCAATCAGCTAAAACAAGATCTGAGGTAAGAGGAGGCGGAATCAAGCCTTGGAGACAAAAAGGAACAGGTAGAGCAAGACAAGGTTCTATCAGAGCGCCTCAATGGATCAAAGGTGGAGTTGTATTTGCACCAAAACCAAGAGATTACAGAATGTCAATACCAAAGAGCATGAGAAAAGTAGCTATGACTTCTGCTTTAACTAGCAAAGTTGCAGATATGGTTGTTTTAGAAGACTTAACTTTCGAAGCTCCAAAAACTAAGGAAGCAGTTAAAATGTTAAATGCTTTCGAAGCTAAGAAGACATTAATAATAACAGCTGAAGTTAATGAAAATGTATATAAATCAGCAAGAAACATAGAAGGTGTAACA
PROTEIN sequence
Length: 171
MPKVGLFNKEGQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVADMVVLEDLTFEAPKTKEAVKMLNAFEAKKTLIITAEVNENVYKSARNIEGVT