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NECEvent2014_5_6_scaffold_696_3

Organism: NECEvent2014_5_6_Propionibacterium_HGH0353-rel_64_7

near complete RP 51 / 55 MC: 5 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: comp(2055..3803)

Top 3 Functional Annotations

Value Algorithm Source
TM0106 family RecB family nuclease n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4CVK9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 582.0
  • Bit_score: 1176
  • Evalue 0.0
  • rbh
TM0106 family RecB family nuclease {ECO:0000313|EMBL:EGY78615.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 582.0
  • Bit_score: 1175
  • Evalue 0.0
nuclease, RecB family protein similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 582.0
  • Bit_score: 1160
  • Evalue 0.0

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Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1749
GTGAAAGGTCCCTCCTCCCCGATCCTCCTCGACGCCTGGGCAGCTCGCAGCTGCCCGGTCAAGACCCAGAACGCCTATGACCCCACCCTGTCAGAACCGGTCGGCGATCCGCGTGACGACGAGCTCTTCGCAGGAGCCGAGGCCCACCTGACGGTCATCTGTGACGCCCTGGCAGCCGTCACGGACGCCGCCGATCTGCGCTCGGCCACCTTGAGCGTGGCCGGTCGCCGGGTCGCCACTCGCAGGGCCATGGACGCCGGCGCACCCGCCATCGTCTGCCCTGAGTTGCCGTCGTCCCCGCAGGAACACCGCACCGGCTCCCCCGACGCCTTGGTGCTGGCCGGCAAGCGTGCCGACGGCGGGCCTGGATACTTGCCGGTCATCGTCAAGGACCACCTGGTGCTGGAGAGCCACCACACCCTGGCGGAATTCACCTGGGTATCCCCCCTGAATGATCCGGATCCTCGCCACGCGCGGATGTCACTGGACCAGACCTTCCGCGCCGGCCGGGAACGCGCCCTCATCCAGGCCGCCCATCACTGGAGGCTCCTCGAGGACCTGGGTCTGGTCGCCACCCCTGACGAGTGCCCCAGCCATCGACGTCTCGTGGGGCTGGTCGGCCACGACGAGGTTGGGATCCTCGACGACGCCCTGGCCGTCTCCTGGCTCGATCTCGACCACAAGTTCATTCGCACCTTCTCGCGCTCGGCCGCCTCAGGATGGCGTCGCCGCAGCGTGCTGGACCGATACGACCACGAGCACACCTTCCGAGTGTCGGTGGCCGAGCACGCCATCGCCGGCGGCGAGCCGATGGTCACCCCGATCGTCGTGCGTGAGTGCGAGTCCTGTCAGTGGTGGGCCATCTGTGAGCCACGTCTCGACGATGCCGATCTCTCCCTGCGCATCTCCAAGGCTCCCCTGGACGTCCGGGAGATCTCGACCCTGCGTCGTCTCGGGGTTTCCACCGTCGACGACCTGGCCGACGCCGACCTGGACGAGCTGCTGCCGGTCTACCTGCCTGAGGTTCAACACCGTCCCCGACCCGAACAACGACTCCGGGCGGCCGCCCGTCGCGCGCGCCTCATCCGTCAGGGAGTCCTGCTGGAGCGCAACGACGAGGGACCCATCGAGGTGGCCTCGTCCCGACTGGAACTCGATTTCGACATCGAGACCTCTCCGGATGGTCGGGTCTATCTGTGGGGTTTCGAGGTCAGTGATCCTGAACGCCTGCTCGACTCGACGACCGGCGACGTGCCCTATTACGTCGCCTTCAGCGAGTTCGCTGACATGGGTGACGACGACGAGAACGCACTGGCTGCCCGCGCCATCGCCTGGCTCGACGAGATCGTCTCGGCCCACCCGGAGACGATCGTGGTCCACTACTCCGACTACGAGATCGTCCATCTGCGTCATTTCGGTCACGTCTGCCAGAACGTGGAGACTCGTCAAGCGGTGCGTCGGCTGCTGGACTCCGGCTGTTTCGTTGACCTCTTCACCACCATCAAGGCGCACTTCTTCGGGGTCAACGGGATTGGTCTGAAGGTCGTTGCCAACGCCGGCGCCGGGTTCTCCTGGCGTGACCCGGACCCGGGTGGCCTCAACTCCCAGACCTGGTGGGACCTCGCCGTCCATGACCCCGATCCGCAGGTCCGCGAGTCCTCCAGAACCCGAGTCATGGAATACAACGAGGACGACGTGAAGGCTACCCTCGCTGTTCGCCGTTGGCTTGCCGAGAGGCCCTCCGAGTAA
PROTEIN sequence
Length: 583
VKGPSSPILLDAWAARSCPVKTQNAYDPTLSEPVGDPRDDELFAGAEAHLTVICDALAAVTDAADLRSATLSVAGRRVATRRAMDAGAPAIVCPELPSSPQEHRTGSPDALVLAGKRADGGPGYLPVIVKDHLVLESHHTLAEFTWVSPLNDPDPRHARMSLDQTFRAGRERALIQAAHHWRLLEDLGLVATPDECPSHRRLVGLVGHDEVGILDDALAVSWLDLDHKFIRTFSRSAASGWRRRSVLDRYDHEHTFRVSVAEHAIAGGEPMVTPIVVRECESCQWWAICEPRLDDADLSLRISKAPLDVREISTLRRLGVSTVDDLADADLDELLPVYLPEVQHRPRPEQRLRAAARRARLIRQGVLLERNDEGPIEVASSRLELDFDIETSPDGRVYLWGFEVSDPERLLDSTTGDVPYYVAFSEFADMGDDDENALAARAIAWLDEIVSAHPETIVVHYSDYEIVHLRHFGHVCQNVETRQAVRRLLDSGCFVDLFTTIKAHFFGVNGIGLKVVANAGAGFSWRDPDPGGLNSQTWWDLAVHDPDPQVRESSRTRVMEYNEDDVKATLAVRRWLAERPSE*