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NECEvent2014_5_6_scaffold_1544_1

Organism: NECEvent2014_5_6_Propionibacterium_HGH0353-rel_64_7

near complete RP 51 / 55 MC: 5 BSCG 48 / 51 ASCG 14 / 38 MC: 3
Location: 2..319

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3XLU6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 105.0
  • Bit_score: 198
  • Evalue 3.40e-48
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propioniba similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 105.0
  • Bit_score: 198
  • Evalue 4.70e-48
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 105.0
  • Bit_score: 196
  • Evalue 4.70e-48

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 318
AATGGCGCCGAGGAGCTGCGAGGTTCGGTGTTGGTGGCTGACGTCGAGGCCGATGAGAAGCCAGCTGATCCAGAAGAGTTCCGGGACCGTCAGTTGCGGGGACTAGCAGTGGTTGACGAGTCGGGTCAGGCACGGGGAACCGTCAAGGACATTCTCCACCTGCCGGCCCAGGATGTGCTCGCCATCGATGTCGACGGCGACGAACATCTGGTGCCGTTCGTTCGCCAGCTCGTTCCCACCGTTGACGTCGCTGCCGGTCAGATCGTTGTCGCCAGTATCCCTGGACTTCTTGACGACGATGCCGAGGAGGCGAGGTAA
PROTEIN sequence
Length: 106
NGAEELRGSVLVADVEADEKPADPEEFRDRQLRGLAVVDESGQARGTVKDILHLPAQDVLAIDVDGDEHLVPFVRQLVPTVDVAAGQIVVASIPGLLDDDAEEAR*