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NECEvent2014_1_5_scaffold_22_6

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 4386..5033

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=24 Tax=Escherichia coli RepID=K3HX01_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 430
  • Evalue 1.40e-117
  • rbh
Putative HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 429
  • Evalue 5.20e-118
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDK47151.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 429
  • Evalue 2.60e-117

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGCATGCCAGCAGCGCGCTTTGGCTGCCCCCACAAATGCCGCATAAGTTTGTTGCGACAGGCAACGTACTTTTAAAAACCGTACTGGTTTCAGAAGCGGAAAGTGAAACGCTGGGAAAAGTTTGCTTCATGACGGGTATTTCACCCCTGTTAAGAGAATTACTAATTGCAATTAACCAACTTCCACCGTCGCAAAGTACCACAGATAAACAACAGTTACGTTTTTCAGCCCTCGAGACACTGATACTTCAGGAAATAAAAATGGGGGTGAAAATGTCACTTGAACTCCCTTGGCCAAATGATGAGCGGCTACAGCAGCTTTGTGAGAATTTGCTAAACAACCAAGGGTATCTGCCAACACTGGATAATCTAGCGGATAAAATTAACGTCAGTAGCCGTACACTCATGCGCTTATTTGTTAAAGAGACGGGATTAACATTTCGCCACTGGGTTCAGCAAATGCACGTTATTTCTGCAGTGACGCTTCTTGATGATGGATATTCGTTGACCAAAATTGCCCATCGTCTGGGCTATGCCTCAGCTGAATCGTTCGGCAATATGTTTAAGCGTCGAACGGGCTACTCGCCCGGTAAATTTACTCGTCGATTAACGATGCATGATTATGCAATCACAAGACAAATGATTTAA
PROTEIN sequence
Length: 216
VHASSALWLPPQMPHKFVATGNVLLKTVLVSEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDKQQLRFSALETLILQEIKMGVKMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINVSSRTLMRLFVKETGLTFRHWVQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKRRTGYSPGKFTRRLTMHDYAITRQMI*