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NECEvent2014_1_5_scaffold_94_27

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(26571..27170)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional repressor NemR n=838 Tax=Enterobacteriaceae RepID=NEMR_ECOL6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 405
  • Evalue 3.40e-110
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 405
  • Evalue 9.60e-111
HTH-type transcriptional repressor nemR {ECO:0000313|EMBL:EQP55055.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 405
  • Evalue 4.80e-110

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAACTCCTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGTTCTAAAGAAGCGTTTGGCGTTGCTATGCTTGAGCGCCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACAGTAAAACTCTCTGCCGAAGTGTGCGATCTGTCAGAAGATATGCGCAGCGCAATGGATAAAGGGGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAG
PROTEIN sequence
Length: 200
MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV*