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NECEvent2014_1_5_scaffold_325_3

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 1316..1744

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigV n=2 Tax=Clostridium butyricum RepID=B1QVY4_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 135.0
  • Bit_score: 272
  • Evalue 2.50e-70
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EEP52780.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 135.0
  • Bit_score: 272
  • Evalue 3.50e-70
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 138.0
  • Bit_score: 150
  • Evalue 3.10e-34

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 429
GTGAAAAATGAAGATGATGCATTGGACATTCTATCAGAAGCAGTTTATAAAGGATACATATCTTTTCACAAATTAAGGGATGAAAAATATTTTGAAACATGGATGATAAGAATAATAATTAATTGTGCAAATGATTTTTTTAAGAAAACAAATAAATATGTCTATTTAGATGAACATAAGATAGAAAATATTAAAGAGGTAAATACATCATTATCAATGGAAGATAGAATGGATTTATATGATCTTATGGATAGGTTACCTGATGATGAAAAGACAATTATAATATTGAAATATTTTCAAGAACTTAATTTTAGAGAAATATCAGAAGTATTATCCCTACCTGAAAATACTGTAAAAAGTAAGTTATATAGGACAATAAAAAAACTAAATAAATATTTAAAAGAAGATGAGGTGAAATTTAATGACTAA
PROTEIN sequence
Length: 143
VKNEDDALDILSEAVYKGYISFHKLRDEKYFETWMIRIIINCANDFFKKTNKYVYLDEHKIENIKEVNTSLSMEDRMDLYDLMDRLPDDEKTIIILKYFQELNFREISEVLSLPENTVKSKLYRTIKKLNKYLKEDEVKFND*