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NECEvent2014_1_5_scaffold_338_8

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 5513..5734

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 73.0
  • Bit_score: 144
  • Evalue 4.30e-32
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 73.0
  • Bit_score: 110
  • Evalue 1.80e-22
DNA-directed RNA polymerase subunit omega n=4 Tax=Clostridium butyricum RepID=B1R2X5_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 73.0
  • Bit_score: 144
  • Evalue 3.10e-32

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 222
ATGAACAACTCTATGATTAATCCATCAGTAGTAGATTTACTAGAAAAAACAAAGGACAGATATTCGTTAGTAATTTTAACATCTAAAAGAGCTAGACAAATAATAGATGGCTCTAAACCACAAGTGGACGCACACTCAAAAAAGCCATTAACAATTGCTATACATGAAGTTGATGAAGATGCTATTAATTTTGAAATAGTGAATGAAGAAGGTTCAAAGTAA
PROTEIN sequence
Length: 74
MNNSMINPSVVDLLEKTKDRYSLVILTSKRARQIIDGSKPQVDAHSKKPLTIAIHEVDEDAINFEIVNEEGSK*