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NECEvent2014_5_7_scaffold_26_29

Organism: NECEvent2014_5_7_Clostridium_perfringens_28_149

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 14664..15284

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 A n=8 Tax=Clostridium perfringens RepID=RS4A_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 416
  • Evalue 1.20e-113
  • rbh
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 416
  • Evalue 3.30e-114
30S ribosomal protein S4 A {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 416
  • Evalue 1.60e-113

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCAAGATATACTGGAGCTACATGTAAGTTATGTAGAAGAGAAGGTATGAAATTATTCCTAAAAGGGGATAGATGTTATACAGATAAATGTGCTTTCGTTAGAAGAAGTTATGCACCAGGACAACACGGAGCAAGCAGAAAGAAATTATCTAACTACGGAACACAATTAAGAGAGAAGCAAAAAGCTAAGAGAATATACGGAGTTCTTGAAGGTCAGTTCAGAAACACATATGAAAGAGCTGAAAAAATGAGAGGAATCGCCGGTGAAAACTTACTTAAATTATTAGAAATGAGATTAGATAACGTTGTTTACAGATTAGGATATGGTGCTTCAAGAACAGAAGCTAGACAATTAGTAAACCACGGTCATTTCTTAGTAAATGGTAAAAAAGTTGATATAGCATCATTCAAAGTATCAGTTAACGATGTTATAACAGTTTGTGAAAAGAGCAGAGGATCAGAAAGATTCAAAATGTTTGCTGAAAATCCAAAAGCTTTACCAAAATGGTTAGAAGCTAACGTTGAAAATTTCGAAGGTAAAGTTGTTGCTGAGCCTGCAAGAGAAGATATCGACGTACCAGTTAACGAGACTCTAATCGTCGAGTTATACAGCAAATAA
PROTEIN sequence
Length: 207
MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNYGTQLREKQKAKRIYGVLEGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQLVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENPKALPKWLEANVENFEGKVVAEPAREDIDVPVNETLIVELYSK*