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NECEvent2014_5_7_scaffold_26_30

Organism: NECEvent2014_5_7_Clostridium_perfringens_28_149

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 15369..16316

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 614
  • Evalue 1.70e-173
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 614
  • Evalue 8.20e-173
DNA-directed RNA polymerase subunit alpha n=11 Tax=Clostridium perfringens RepID=RPOA_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 614
  • Evalue 5.90e-173
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGTTAGAAATAGAAAAGCCAGTAATTCAATGTGTTGAATCAAACGATAACGGAACATATGGTAAGTTTGAGATAGAACCATTAGAAAGAGGTTATGGAATAACTCTTGGTAATGCATTAAGAAGAATATTACTTTCTTCTTTACCTGGAGTGGCTCCAACTTCAGTTAAAATAGATTCAGTTCTTCATGAGTTTTCAACAATAACAGGTGTTAAAGAAGATGTTACAGAGATAATCTTAAATCTTAAAATGTTAGCACTTACTATGGAAGGTGAAGGACCAAAAACTATTTATATTGATGCTCAAGGACCAGGTGTTGTTACTGGAGCAGATATAAAAACAGATGGTGATGTAGAAGTTGTAAACAAAGATCTACATATCGCTACATTAGACAACGATGGTAAGTTATATATGGAAATCGTAGTTAATAGAGGAAGAGGATATGTTACTCAAAACAAAAATAAAACAGAAGATCTTCCATTATCAGCTATTGCTATAGATTCTATATACACTCCTGTAAAGAGAGTTAATTTCTCTGTTCAAAATACAAGAGTTGGTCAAATTACTGACTATGATAAACTTACATTAGAAATTTGGACTAATGGAACTATAAGAATAGAAGAAGCGATTTCATTATCAGCTAAAATTCTTATAGAGCACTTCAAATTATTCATGACTTTAACTGACAACGCTAATGATGTTGAGATAATGATTGAAAAAGAAGAAGATAAAAAAGAAAAAGCTTTAGAGATGACTATAGAAGAGCTTGACTTATCAGTAAGATCATACAATTGCTTAAAGAGAGCAGGTATAAACACTGTTCAAGAGCTTGCGGGCAAGAGCATGGATGATATGATGAAAGTTAGAAACTTAGGTAAGAAATCTCTAGAAGAAGTAGAAAGAAAGTTAAACGAGTTAGGCTTAAATTTAAGACTAAATGACGAGTAG
PROTEIN sequence
Length: 316
MLEIEKPVIQCVESNDNGTYGKFEIEPLERGYGITLGNALRRILLSSLPGVAPTSVKIDSVLHEFSTITGVKEDVTEIILNLKMLALTMEGEGPKTIYIDAQGPGVVTGADIKTDGDVEVVNKDLHIATLDNDGKLYMEIVVNRGRGYVTQNKNKTEDLPLSAIAIDSIYTPVKRVNFSVQNTRVGQITDYDKLTLEIWTNGTIRIEEAISLSAKILIEHFKLFMTLTDNANDVEIMIEKEEDKKEKALEMTIEELDLSVRSYNCLKRAGINTVQELAGKSMDDMMKVRNLGKKSLEEVERKLNELGLNLRLNDE*