ggKbase home page

NECEvent2014_5_7_scaffold_4829_1

Organism: NECEvent2014_5_7_Peptoclostridium_sordelli-rel_28_6

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 13 / 38
Location: comp(1..1281)

Top 3 Functional Annotations

Value Algorithm Source
Sensory box protein n=2 Tax=Clostridium sordellii RepID=T0E2C9_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 427.0
  • Bit_score: 841
  • Evalue 3.10e-241
  • rbh
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CEN74737.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK35393.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 427.0
  • Bit_score: 844
  • Evalue 5.10e-242
sigma-54 dependent regulatory protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 443.0
  • Bit_score: 510
  • Evalue 4.60e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1281
GTGAAATACAATAACGATTTTTTCGAAAAAATATTAGAAGCTTCTCATGATGAAATTTTTGTTTGTGATAAAGATGGTTATATGATTTATTGTAACAAAGCATTTGAATCTAATTACGGTATTAACAGAAATGATATGCTAGGAAAAACAGTTATGTTTTTAAATGAAGAAGGTTATTCAAATCAAAGTCCTGTTCCAAATGTATTAAAGCATAAGAAAAAAATATCTATGGAACAAAAAACTATAACTGGCAAAACATTAATTATAACTGCTACCCCAGTTTTTGATGATTTAGGAAACATAGAATTTGTAGTAGAAAATTCTAGAGATATAAGTGAGTTGAATAATATAAAAAATAAACTTGAACATACAAAAGAAAAAATAAAAGAATACGAAAATAAAATAGACTCTTTAAATAAATCTCAGTCATTAGTTTATAATGATACTACAATAAAAGGTTCTAGTATGAAATTACTTTTAGAAATTTCAGAAAATGTGTCCAAGGCAAATGTTAACGTTTTATTACTAGGTGAATCTGGTTGTGGTAAATCTACATTGGCTAAGCATATACATTTAAATAGTCCTAGAGCTCACAAGCCCTTTATAACTATAAATTGTTCTACCATTTCTCCTAATTTACTTGAGTCAGAATTATTCGGATATGAGTCTGGAGCGTTTACAGGAGCTAATAGCAAAGGAAAAATCGGACTTGTTGAACTTGCAGATGGTGGTACTTTATTTTTAGATGAAATAGGAGATATTCCTCCTGAACTTCAATCTAAATTTTTACAGTTAATTCAAGAAAAGACTTTTACTTCTGTAGGCGGTGTTAAAAATAAAAAAGTTGATATAAGACTTATATCTGCAACTAATGTTGATTTATTAAATTCTGTAAATGAAAAAAAATTTAGAGAAGATTTATATTATAGAATAAATGTTGTGGAGTTAAAAATACCTCCACTTAGAGAACGCAAGGAAGATTTACTAGAACTAATTTTTCACTTTTTTAAAAAATACTCAGAGTCATTTAATGTAAAAAAAACATTATCTACACAAGTTATTAATGCACTTTTAGATTATGATTACCCTGGTAATATTAGAGAACTTGAAAATATAATTCAAAACATTTTAGTTACATCTAACACAGATGTTATAGAGATTTCTAATTTACCAAAATCAGTTCTTAGTCATATAACACTATTTACAGATGAGTATAATCACTCACTAGATGTTTTAATGAATAATTATGAAAAAAATATAATTTGTAAATCATATCAGAAA
PROTEIN sequence
Length: 427
VKYNNDFFEKILEASHDEIFVCDKDGYMIYCNKAFESNYGINRNDMLGKTVMFLNEEGYSNQSPVPNVLKHKKKISMEQKTITGKTLIITATPVFDDLGNIEFVVENSRDISELNNIKNKLEHTKEKIKEYENKIDSLNKSQSLVYNDTTIKGSSMKLLLEISENVSKANVNVLLLGESGCGKSTLAKHIHLNSPRAHKPFITINCSTISPNLLESELFGYESGAFTGANSKGKIGLVELADGGTLFLDEIGDIPPELQSKFLQLIQEKTFTSVGGVKNKKVDIRLISATNVDLLNSVNEKKFREDLYYRINVVELKIPPLRERKEDLLELIFHFFKKYSESFNVKKTLSTQVINALLDYDYPGNIRELENIIQNILVTSNTDVIEISNLPKSVLSHITLFTDEYNHSLDVLMNNYEKNIICKSYQK