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NECEvent2014_5_7_scaffold_1560_3

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(2368..3165)

Top 3 Functional Annotations

Value Algorithm Source
Membrane subunit of A-band LPS efflux transporter n=114 Tax=Pseudomonas RepID=B7V5Z2_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 265.0
  • Bit_score: 525
  • Evalue 2.30e-146
  • rbh
ABC-2 type transporter family protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 265.0
  • Bit_score: 525
  • Evalue 6.50e-147
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 265.0
  • Bit_score: 525
  • Evalue 3.20e-146

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGCTTCTTGGCTTGTCTCGTTCCTTGTGGGGCTATCGTGGCTTCGTTCTCGGCAGCGTCAAGCGCGAGTTCCAGTCGCGCTACCGCGGGTCGCTGTTCGGCGCGTTGTGGACGGTGCTCAATCCGCTGTCGATGATCGTCGTCTACACGGTGATCTTCTCCCAGGTGATGCGCGCGCGCCTGCCGGGGGTCGACGACGGCCTGGCCTACAGCGTCTATCTCTGCGCCGGCCTGCTGACCTGGGGCCTGTTCGCGGAAATCACCTCGCGCAGCCAGAGCATGTTCATCGAGAACGCCAACCTGCTGAAGAAGATCAGCTTCCCGCGCATCTGCCTGCCGGTCATCGTACTGCTCAACGCCGGGGTCAATTTCGCCATCATCCTCGCCTTGTTCCTCGGCTTTCTCGCCCTCAGCGGGCGCCTGCCGGGCGCGGCATTGCTCGCGCTGGTGCCGCTGCTGGCGATCCAGGTGCTGTTCGCGGCGGGACTGGGGATGATCCTCGGGGTGCTCAACGTGTTCTTCCGCGACGTCGGCCAGTTGTTCGGCATCTGCCTGCAGTTCTGGTTCTGGCTGACGCCGATCGTCTATCCGATCGGCATCCTGCCCGAGGGTATCCGCTCGCTGATCGAACTCAACCCGATGACCGCGCTGATGCGCAGCTACCAGCAGCTGTTCCTCCACGGGCAATGGCCGGACTGGCCTTCATTGCTGCCGATCACCCTGCTGGCGCTGCTGCTGTGCGCGCTCGGCCTGCGTCTGTTCCGCCAGCGGGTCGGCGAAATGGTGGATGAACTCTGA
PROTEIN sequence
Length: 266
MLLGLSRSLWGYRGFVLGSVKREFQSRYRGSLFGALWTVLNPLSMIVVYTVIFSQVMRARLPGVDDGLAYSVYLCAGLLTWGLFAEITSRSQSMFIENANLLKKISFPRICLPVIVLLNAGVNFAIILALFLGFLALSGRLPGAALLALVPLLAIQVLFAAGLGMILGVLNVFFRDVGQLFGICLQFWFWLTPIVYPIGILPEGIRSLIELNPMTALMRSYQQLFLHGQWPDWPSLLPITLLALLLCALGLRLFRQRVGEMVDEL*