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NECEvent2014_5_7_scaffold_1572_6

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(3780..4229)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Pseudomonas aeruginosa HB15 RepID=V4MUF0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 149.0
  • Bit_score: 317
  • Evalue 9.20e-84
  • rbh
putative DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 318
  • Evalue 1.20e-84
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79364.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 318
  • Evalue 5.80e-84

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGCAGAACGCCCGTTTCGACATCCGCGGCTACAACCGCGCCTATTGCCGGCTGGTGGGCATCGACCTGGCGGAGATCCCCGAGGAAGACCGCAACTGCATCTACCTGGCGCTGACCCACGAGCGCTGGCGCTACTGCATGGCCAACCGCGAGGAGGCGTTGCCGCGGATGGTCGGCTTCTTCCGCGCGGCAATGGTCGAGCGCATGGGCGATCCGCTGTGGGAGCGGCAGTTGCAGCGCTGCCTGGAGGCTTCGGCGGAGTTCCGCGAGATCTGGCGGCGCAACGAGGTGATGGGTATCGAAAACCAGCTCAAGCGCTTCCGTCATGCGCGCTGCGGCGAATTCGAACTGCAGCAGACCAACTGGTGGTCGGCGCCGAAGAACGGCGATCGCCTGCTGGTCTTCGTCCCCCTCGACGACCACGCCCGCGACTGCCTGGAGCAACTGTGA
PROTEIN sequence
Length: 150
VQNARFDIRGYNRAYCRLVGIDLAEIPEEDRNCIYLALTHERWRYCMANREEALPRMVGFFRAAMVERMGDPLWERQLQRCLEASAEFREIWRRNEVMGIENQLKRFRHARCGEFELQQTNWWSAPKNGDRLLVFVPLDDHARDCLEQL*