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NECEvent2014_5_7_scaffold_1970_2

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(408..1037)

Top 3 Functional Annotations

Value Algorithm Source
DesT n=82 Tax=Pseudomonas RepID=B7V1V3_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 409
  • Evalue 1.90e-111
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 409
  • Evalue 5.40e-112
DesT {ECO:0000313|EMBL:CEI12478.1}; TetR family transcriptional regulator {ECO:0000313|EMBL:AKE72584.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 409
  • Evalue 2.70e-111

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTCCTCACCCCGCGCCGAACAGAAACAGCAGACCCGCCACGCGCTGATGAGCGCCGCGCGCCACCTGATGGAAAGCGGGCGCGGCTTCGGCAGCCTCAGCCTGCGCGAAGTGACGCGCGCCGCCGGCATCGTCCCGGCCGGCTTCTACCGGCACTTCAGCGACATGGACCAGCTCGGCCTGGCGCTGGTCGCCGAAGTCGACGAGACCTTCCGCGCCACCCTGCGCGCGGTGCGCCGCAACGAGTTCGAACTGGGCGGGCTGATCGACGCCTCGGTGCGCATCTTCCTCGACGCGGTCGGCGCCAACCGCTCGCAGTTCCTCTTCCTCGCCCGCGAGCAATACGGCGGCTCGTTGCCGATCCGCCAGGCCATCGCCAGCCTGCGCCAGCGCATCACCGACGATCTGGCCGCCGACCTGGCGCTGCTGAACAAGATGCCGCACCTCGACGGCGCGGCCCTCGACGTGTTCGCCGACCTGGTGGTGAAGACCGTCTTCGCCCCCCTTCCGGAGCTGATCGACCCACCCGCCGCCGATCTGCCGCCGCACCTGATGCCGGCCGCGAAGATCACCCACCAGCTGCGTTTCATCATGATCGGCGGCAAGCACTGGCACGGCCTGCCCGGCTGA
PROTEIN sequence
Length: 210
MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFAPLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPG*