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NECEvent2014_5_7_scaffold_1977_2

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(300..848)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1457392 species="B similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 369
  • Evalue 2.70e-99
2'-5' RNA ligase n=2 Tax=Pseudomonas aeruginosa RepID=U8QSE1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 373
  • Evalue 1.00e-100
  • rbh
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 182.0
  • Bit_score: 372
  • Evalue 8.30e-101
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCCCGATCGCTCTCTTCGCCTGTTCTTCGCCCTGCCCTGCCCACCTCCCCTCGCCGAGCGGATCGGCCGGTGGCGCGATGGCCGGCCACTACCCGGACGCCAGGTGGCGACGGCGAACCTGCACCTGACCCTGGCCTTCCTCGGGCAGGTCCCGTCCGCTCGGCTCGAGGCCCTGCTGGACATGGCCGCGGCCATCGAAGCCGCGCCCTTCGACCTGTGTCTCGACCGTCTGCTGCGCTGGAGGAACGGCATCCTGCTGCTGGCCCCCAGCCAACCGCCCGGCGCCCTCCTGCGCCTGCGCCGCGCCCTGCGCTCCGGCCTTGCCGAACTGGAGCTGCCTGTGGAAACCCGCCCATTCAGCGCCCATCTGACCCTGGTTCGCGATGTCGCGCCGCTGGAGGACGCCCCGCTACCCCCAACCTTCGTATGGCAGGTCGACCATTTCAGCCTGTTTTGCTCGCAAAACGACGCCGCGGGCGTGCGCTACCGCACACTCGGTCGCTGGGCGTTGTGCGGGGAAGATTCAAACGAGCGTTTCGCGCCGTAA
PROTEIN sequence
Length: 183
MPDRSLRLFFALPCPPPLAERIGRWRDGRPLPGRQVATANLHLTLAFLGQVPSARLEALLDMAAAIEAAPFDLCLDRLLRWRNGILLLAPSQPPGALLRLRRALRSGLAELELPVETRPFSAHLTLVRDVAPLEDAPLPPTFVWQVDHFSLFCSQNDAAGVRYRTLGRWALCGEDSNERFAP*