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NECEvent2014_5_7_scaffold_901_7

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(5318..5722)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=110 Tax=Pseudomonas RepID=B7V773_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 270
  • Evalue 8.90e-70
C4-type zinc finger protein, DksA/TraR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 270
  • Evalue 2.50e-70
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 270
  • Evalue 1.20e-69

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGACCGAACAGGAACTGCTTGCCCAGCCCGACGCTGCCTACATGGACGAAGCCCAGCAGGACTTCTTCCGCGACCTGCTGCTGCGTCAGCGCCAGGAACTTCAGGCGCGCATCGAAGGCGAATTCGGCGAGCTGCGCGATCTCGAACGCCCCAGCGACGAGGCCGACCTGGCTTCCCGCGAGGAACAGCGGCAATGGCAACTTCGCCTGCTGGAGCGGGAGAAGAAGCTGCTCGACAAGATCGACGAAGCGCTGGAGCGCCTGGCCCGCGGCGACTACGGCTGGTGCCAGGAAACCGGCGAGCCGATCGGCCTGCGCCGCCTGCTGTTGCGTCCCACCGCCACCCTCTGCATCGAGGCGAAAGAGCGCCAGGAGAAGCGCGAACGCCACGTGCGGCACAACTGA
PROTEIN sequence
Length: 135
MTEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLLDKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN*