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NECEvent2014_5_7_scaffold_966_7

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(4527..5420)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=8 Tax=Pseudomonas aeruginosa RepID=U1F8S5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 296.0
  • Bit_score: 498
  • Evalue 4.40e-138
  • rbh
Glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 296.0
  • Bit_score: 498
  • Evalue 1.20e-138
LysR family transcriptional regulator {ECO:0000313|EMBL:AKE71532.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 297.0
  • Bit_score: 497
  • Evalue 1.40e-137

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGTTCGCTTCCCTGCCGCTGACCGCGTTGCGCACCTTCGAATCGGCGGCCCGCCAGTCGAGCTTCAAGGCCGCCGCCGAGGAGCTTGCGGTAACGCCAACCGCGGTTTCCCACCAGATCCGTTCGCTGGAAGCCTGGCTCGGCGTTCCGCTGTTCCAGCGCCTGCCACGGAAAGTGCGCCTGACCGACTGTGGCGAACGGCTGTTCCGCAGCCTGCACGGGGCCCTGCTGGAAATTTCGCAGAGCGTCGACACGCTGCGTCCGCAGCGCAACGTAGGCAACCTGACGGTCTCCACCACCCCGGCCTTCGCCGCCCTCTGGCTGGTGCCGCGTCTCGGCCGCTTCTACGCCGCGCACCCGCAGATCAACCTGCGCCTGGACACCAACTGCGAAGTCCTCGACCTGCACCAGGACGCCAGCATCGACCTGGTGATCCGCTACAGCCTCGACGACCATCCGAACTTCTACGGTCTCTGCCTGTTCGACGAATGCTTCGCGGTCTACGGCTCGCCGGCCCAGGTCGCCCTGGCCGCAGAACGGCAGCCGACCCTGATCAGCGTGCGCTGGCACAACTCCAGGCTCTACGCCCACGGCTGGGAGGCCTGGTGCGCGCAGGCCGGCGAAGACTGGATGGAGGGCCAGCCGGTGATCCGCCAGTACGACGAGGAGCACTACGCCCTGCAGGCGGCCATCGCCGGCCAGGGCGTGGCCATCGGCTGGCGCCACCTGGTCGACGGCCTGCTCGAACAGGGGCTGCTTTGCCGGCCCATTGGCGAGAGCTGCCTGTCGCGATACGGGTACTATGCGGTATTGCCGGAGCGCAAGCGGCGCCAGCGGCTGGTCGACGGTTTCGTCGACTGGCTACAGGCCGAGTTGCAGGCCGGCGGCGCTTGA
PROTEIN sequence
Length: 298
MFASLPLTALRTFESAARQSSFKAAAEELAVTPTAVSHQIRSLEAWLGVPLFQRLPRKVRLTDCGERLFRSLHGALLEISQSVDTLRPQRNVGNLTVSTTPAFAALWLVPRLGRFYAAHPQINLRLDTNCEVLDLHQDASIDLVIRYSLDDHPNFYGLCLFDECFAVYGSPAQVALAAERQPTLISVRWHNSRLYAHGWEAWCAQAGEDWMEGQPVIRQYDEEHYALQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA*