ggKbase home page

NECEvent2014_5_7_scaffold_967_2

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(970..1554)

Top 3 Functional Annotations

Value Algorithm Source
DNA packaging protein n=4 Tax=Pseudomonas aeruginosa RepID=V5T1B3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 353
  • Evalue 1.20e-94
  • rbh
Putative small subunit (Nu1 homolog) of DNA packaging dimer {ECO:0000313|EMBL:CEI01776.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 382
  • Evalue 3.20e-103
DNA packaging protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 353
  • Evalue 3.20e-95
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGTATGACCTTTTTTCGGAGGTTGGTTGTTGTTTTGTCATGAGCACAGAAGACCTCCAAAAAAAGCGCGGGTGGCTGAACAAGTCCGAGATGGCCGCGAGCCTCGGGATTTCTCCGCAAGCCTTTGATAAATGGGGCGTTGAGCCTGCCGCCAAGATCGGCCGCGAGGTGTTCTATACCGCCCAGGCGGTGCTACAGAATCGCCTCGATCATGCGACCCAGAAACAACAACCTGAGGGCCTAGATGCGGAAGGTCTCGACCCGCTCGCTGAAAAGAAATTGCTACAGGAGCGCCTGCGACTGACGACTGCTCAGGCTGACGCCCAGGAGCAGAAGAACCAGGTCCAAGCGAAGACCCTTGTTCCGACTCCGTTCGCCACCTTCGCTCTTGCCAGGATCGCGTCCAAGATCGGCTCGAAACTGGAGACGGTCTGCAAGACGGTCCGCAGCCAAATACCCGATACACCGCCGTTGGTGCTGGAGGCCTTTGAGCGCGAGATAGCGCTGGCCCGAAATCTGGCCGTGGAGTTTGCCGAAGACCTACCGGAAATCCTTGATGAGTACTCTGCCACCCTGGATGAATGA
PROTEIN sequence
Length: 195
MYDLFSEVGCCFVMSTEDLQKKRGWLNKSEMAASLGISPQAFDKWGVEPAAKIGREVFYTAQAVLQNRLDHATQKQQPEGLDAEGLDPLAEKKLLQERLRLTTAQADAQEQKNQVQAKTLVPTPFATFALARIASKIGSKLETVCKTVRSQIPDTPPLVLEAFEREIALARNLAVEFAEDLPEILDEYSATLDE*