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NECEvent2014_5_7_scaffold_2904_3

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 1919..2290

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 124.0
  • Bit_score: 253
  • Evalue 1.50e-64
RsmD family RNA methyltransferase n=2 Tax=Pseudomonas aeruginosa RepID=U8QJQ3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 255
  • Evalue 2.70e-65
rsmD; 16S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 124.0
  • Bit_score: 253
  • Evalue 2.90e-65

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGAGTAAACCTACTGCGAAAGCCCCCGGCCGCCACGGCGGCCAGGGACAGCTGCGGATCATCGGTGGCGAATGGCGCAGCCGGCGTTTCGTCTTTCCCGACGGGCCCGGCCTGCGACCGACCCCGGACCGGGTCCGCGAGACCCTGTTCAACTGGCTGGCACCCTATGTCGAAGGCGCACGGGTGCTCGATCCCTTCGCCGGCAGCGGCGCGCTGTTCCTCGAGGCGTTGTCGCGCGGCGCCCGCGAAGGGCTGGCCCTGGATACCAACGGCGAAGCGGTGGCGGCCCTGCGCAACCACCTCGACGCGCTCAAGTGCGGCACCGCCCAACTGGTCCTCGGCGATGCCGTGCGCTACCTGGGAAACCAGACT
PROTEIN sequence
Length: 124
MSKPTAKAPGRHGGQGQLRIIGGEWRSRRFVFPDGPGLRPTPDRVRETLFNWLAPYVEGARVLDPFAGSGALFLEALSRGAREGLALDTNGEAVAALRNHLDALKCGTAQLVLGDAVRYLGNQT