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NECEvent2014_5_7_scaffold_4781_2

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 700..1164

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=87 Tax=Pseudomonas RepID=Q9I752_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 154.0
  • Bit_score: 305
  • Evalue 3.70e-80
  • rbh
Type VI secretion lipoprotein/VasD similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 154.0
  • Bit_score: 305
  • Evalue 1.00e-80
Type VI secretion lipoprotein {ECO:0000313|EMBL:ERV74064.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 154.0
  • Bit_score: 305
  • Evalue 5.20e-80

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCAGAAACTGATCGTCGCGCTGTTCGGGCTGCTGCCCGCCGCCTGTTCGTCCAGCCCGCCGGAAACCCCGCCGACCCGGGTGGTGATCTGGCTCCACGCCGCACCGAACCTCAACCCGTCCGCCGCCGGCCAGGCGGCGCCGCTGCGCCTGCGGCTGTACGAGCTGAAGAAAGACACCGCGTTCGGCCGCGCCGACTACTTCGCCCTCACCGACAACGCCCAGTCGACCCTCGGTGGCGACCTGGTGGAGCAGGACGAGTTCCTCCTGCGTCCGGGCGAGGAACGGCGCATCGAACGCACGCTCGACGAGCAGACCCGCCAGCTCGGTTTCGTCGCCGCCTACCGCGACCTCGACCGCGCCACCTGGCGCCAGGTCCTCGACGTGCCGGGGCAACGCACCAGCCATCTCGACATCACGCTCGGCGCGCAGGCCATCGGCATCGTCGCGCGTCCCGCGCCCTGA
PROTEIN sequence
Length: 155
MQKLIVALFGLLPAACSSSPPETPPTRVVIWLHAAPNLNPSAAGQAAPLRLRLYELKKDTAFGRADYFALTDNAQSTLGGDLVEQDEFLLRPGEERRIERTLDEQTRQLGFVAAYRDLDRATWRQVLDVPGQRTSHLDITLGAQAIGIVARPAP*