ggKbase home page

NECEvent2014_5_7_scaffold_5140_2

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 636..902

Top 3 Functional Annotations

Value Algorithm Source
Translocation protein in type III secretion n=128 Tax=Pseudomonas RepID=M9S476_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 165
  • Evalue 2.00e-38
Type III secretion inner membrane protein (YscS, flagellar export components) similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 165
  • Evalue 5.70e-39
Yop protein translocation protein S {ECO:0000313|EMBL:ERV78272.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 165
  • Evalue 2.80e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAGCAGCGCCGACATCCTCCACTTCACCAACCAGACCCTGTGGCTGGTGCTGGTCCTGTCGCTGCCGCCGGTACTGGTCGCGGCCCTGATCCGCACCCTGGTATCGCTGGTCCAGGCACTCACCCAGATCCAGGAGCAGACCCTCGGCTTCGTCGCCAAGCTGGTGGCCGTGGTGGTGGTACTGTTCGCCACCAGCGGCTGGCTGGGCGGCGAGCTGTACCGTTTCGCCGAAATGACCCTGCTGAAGGTGCCGCTGGTGCGATGA
PROTEIN sequence
Length: 89
MSSADILHFTNQTLWLVLVLSLPPVLVAALIRTLVSLVQALTQIQEQTLGFVAKLVAVVVVLFATSGWLGGELYRFAEMTLLKVPLVR*