ggKbase home page

NECEvent2014_5_7_scaffold_5182_2

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(499..771)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU-beta n=139 Tax=Pseudomonas RepID=DBHB_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 172
  • Evalue 1.70e-40
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 171
  • Evalue 1.40e-40
Transcriptional regulator {ECO:0000313|EMBL:EQM66861.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alc similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 171
  • Evalue 6.90e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAACAAGTCGGAACTGATCGATGCAATTGCCGCATCTGCTGATATCCCGAAAGCTGTTGCCGGTCGCGCACTGGACGCAGTGATCGAGTCCGTCACTGGCGCCCTGAAGGCTGGTGACTCCGTCGTGCTGGTTGGTTTCGGCACCTTCGCTGTCAAAGAGCGCGCTGCTCGCACCGGTCGCAACCCGCAAACTGGCAAGCCGATCAAGATCGCCGCTGCCAAGATCCCGGGCTTCAAAGCCGGTAAAGCCCTGAAGGATGCTGTCAACTAA
PROTEIN sequence
Length: 91
VNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTGRNPQTGKPIKIAAAKIPGFKAGKALKDAVN*