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NECEvent2014_5_7_scaffold_3950_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 2..664

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein F n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L2L9_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 429
  • Evalue 2.40e-117
  • rbh
Flp pilus assembly protein TadB similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 429
  • Evalue 6.90e-118
TadB {ECO:0000313|EMBL:AHW72999.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 429
  • Evalue 3.40e-117

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GCAGTGCTCGCGCTGCTGCTGGTCTGGAGCGGATTGGGCCTGTTCGGCACCATCGGCGCGCTAGGCGGCCTGCTACTGGCGGCGCTGTCCTGCCGCGTCGCCCTGGGCATGCTCTACCAGCGCCGCCTGAAGCGAATGATCCGGCAGATGCCGCGTTTCCTCGACCAGGTGGTGCGCAGCCTGCACGCCGGGCGCACGCTGGGCGACGCGCTGATGCAGGCAGTGGAGAATGCCGAGGAGCCGCTGCGCGACATCTTCACCCTGGCGCGCAACCACGTGCTTCTCGGCATCCACCTGCCGGAGGCGTTGCAGGAAGTCGCCGAACTCTACGAGGTTGAGGAGCTGCGCATCCTCGCCCTGGGCGTCTCGGTCAACCACCGTTATGGCGGCAATACCAGCGACCTGCTGGACAGCATCGTCAAGCTCATCCACGAGCGCGAGAAGCTCAGCCGGCAGTTGCACGCGATGACCGGCGAGACACGGATCAGCGCCTATGTCCTGGCCGGCGTGCCGAGCGCCCTGGGCGGCTACATCCTGGCGAGCAACCCGGGCTATCTGCTGAACATGTGGGCCGACGGCACCGGGCGTTTCCTGCTGCTGGCCTCGCTCGGGCTGCAACTGCTCGGCTGCTATGCGCTGTGGCGCATGCTCAAGAGCGTCTAG
PROTEIN sequence
Length: 221
AVLALLLVWSGLGLFGTIGALGGLLLAALSCRVALGMLYQRRLKRMIRQMPRFLDQVVRSLHAGRTLGDALMQAVENAEEPLRDIFTLARNHVLLGIHLPEALQEVAELYEVEELRILALGVSVNHRYGGNTSDLLDSIVKLIHEREKLSRQLHAMTGETRISAYVLAGVPSALGGYILASNPGYLLNMWADGTGRFLLLASLGLQLLGCYALWRMLKSV*