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NECEvent2014_5_7_scaffold_3280_3

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(1396..2022)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator prtR n=1 Tax=Pseudomonas aeruginosa CF5 RepID=U9PP95_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 420
  • Evalue 8.20e-115
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 420
  • Evalue 2.30e-115
HTH-type transcriptional regulator prtR {ECO:0000313|EMBL:ERV72730.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 420
  • Evalue 1.20e-114

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GCCCAGAGCACCCGCAAGCTGATCGAGATCGCGGCGGCCCTGGGCGTCTCGCCGGTCTGGCTGCAGACCGGCGAAGGCGCTCCAGCCGCGCGCAGTGCCGTGTCCGTGGCCGATGGCAGCCCATTGGTGCTGGAACCGCTGCATCCGTGGGACAGCGACACACCGCTGGACGAAGACGAAGTGGAACTGCCGCTGTACAAGGAAGTGGAGATGTCCGCCGGCGCCGGACGCACTGCGGTGCGCGAGATAGAGGGGCGCAAGCTGCGTTTTTCCTACGCCACGCTGCGTGCCTCGGGCGTCGATCCGTCGGCGGCGATCTGCGCCCAACTCACCGGCAACAGCATGGAACCGCTGATCATGGATGGCTCCACCATCGGCGTGGACACCGCCACCACCCATATCACCGATGGCGAGATCTACGCCCTCGAACATGACGGCATGCTGCGGGTGAAGTTCGTCTATCGCCTGCCCGGCGGCGGCATTCGCCTGCGCAGCTTCAACCGCGAGGAATATCCGGACGAGGAGTACTCGCCGGAGGACATGCGCAGCCGCCAGATCAGCATGATCGGTTGGGTCTTCTGGTGGTCCACCGTACGCCACCGGCGCGGCCCGTCCCTGGTGCGGTGA
PROTEIN sequence
Length: 209
AQSTRKLIEIAAALGVSPVWLQTGEGAPAARSAVSVADGSPLVLEPLHPWDSDTPLDEDEVELPLYKEVEMSAGAGRTAVREIEGRKLRFSYATLRASGVDPSAAICAQLTGNSMEPLIMDGSTIGVDTATTHITDGEIYALEHDGMLRVKFVYRLPGGGIRLRSFNREEYPDEEYSPEDMRSRQISMIGWVFWWSTVRHRRGPSLVR*