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NECEvent2014_5_7_scaffold_5914_1

Organism: NECEvent2014_5_7_Pseudomonas_aeruginosa_66_6

near complete RP 47 / 55 MC: 3 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(2..1033)

Top 3 Functional Annotations

Value Algorithm Source
Putative porin {ECO:0000313|EMBL:CKH30046.1}; EC=3.4.21.- {ECO:0000313|EMBL:CKH30046.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 344.0
  • Bit_score: 693
  • Evalue 1.50e-196
Porin n=2 Tax=Pseudomonas aeruginosa RepID=U8QWZ1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 344.0
  • Bit_score: 694
  • Evalue 4.90e-197
  • rbh
opdB; proline porin OpdB similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 344.0
  • Bit_score: 693
  • Evalue 3.10e-197

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGATCCGCGTTCGACCGGTCGGCCGCCTGGCCCTTTTCCTGGCGCTGGGCGGCACCTCGCCGTGCCACGCCGCGACAGAGGAAGCCAAGGCACCCGACTACCTGGAGTGGCGCCTGCTCAACCGCAACTACTTCCTCTACAACGACTATCGCCGCGCGGACGCCGGGCGCGGCTACCGCAAGGAATGGGCACACGGCCTGATCGTCGACCTGGAGTCGGCCTATACTCCCGGCCGCGTCGGTTTCGGCCTCGATCTCCACGGCTTCGCCGGCTTCAAGCTCGACGGCGGACGTGGCCATGCCGGCACCGGCCTGTTGCCGCTGGACTCATCCGGCGATAACGCCAGCGAGTATTCCGACGCCGGCGCCGCACTCAAGCTGCGGCTCGGCGAGAGCCTGCTCAAGGTCGGCGAGATGACCGTCGAGACCCCGGTCTTCGATACCAGCGACAAGCGCCTGCAACCCCAGTACGCCAGGGGCTTCTTCCTGCAGAGCGACGACCTCGACCGCGTGCGGATCCAGGCCGGGCGCTTCACCGCCTTCAAGGAACAGGCCTCCAGCTCCGGCCATGGCGACTTCGACGGCTACGGCGCGAGCACCGCCGGCAGCGCCATTGGCTTCGCCGGCGCCAGCCTGGCGGCCAGCGACAACCTGAGCGGCTCGCTGTTCGCCTCGCAACTGGACAACGTCTGGCGCCAGGTCTATCTCAACATGAACCTGCAACGTGCCGCGTTCAGCCTGGATGGCAACCTCTATCGCACGCGCGACCAGGGCCGCAGCCGGGCCGGCGCGATCGATACCCTGGCCTACAGCCTGCAACTGAAGTACCGCGTCGGCGCGCAGGGTTTCTCCCTGGCCTACCAGCGTGTCCATGGGGATACGCCGTTCGACTTCGTCGGAGGTGACTCCATCTACCTCGCCAACTCGATCAAGTACGCCGATTTCAACGGTCCCGGCGAACGCTCCTGGCAGGCCCGCTACGACCTCGACCTGGCCCCGTTCGGCCTGCCGGGGCTGAGCTTCATGACCCGC
PROTEIN sequence
Length: 344
MIRVRPVGRLALFLALGGTSPCHAATEEAKAPDYLEWRLLNRNYFLYNDYRRADAGRGYRKEWAHGLIVDLESAYTPGRVGFGLDLHGFAGFKLDGGRGHAGTGLLPLDSSGDNASEYSDAGAALKLRLGESLLKVGEMTVETPVFDTSDKRLQPQYARGFFLQSDDLDRVRIQAGRFTAFKEQASSSGHGDFDGYGASTAGSAIGFAGASLAASDNLSGSLFASQLDNVWRQVYLNMNLQRAAFSLDGNLYRTRDQGRSRAGAIDTLAYSLQLKYRVGAQGFSLAYQRVHGDTPFDFVGGDSIYLANSIKYADFNGPGERSWQARYDLDLAPFGLPGLSFMTR