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NECEvent2014_5_1_scaffold_428_9

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 7607..8344

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propio similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 245.0
  • Bit_score: 482
  • Evalue 5.00e-133
Pseudouridine synthase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3Y1A1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 245.0
  • Bit_score: 482
  • Evalue 3.50e-133
  • rbh
ribosomal large subunit pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 245.0
  • Bit_score: 475
  • Evalue 1.20e-131

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGAGCGACGAGCAAGGTATCCGGCTTCAGAAGGTGCTGGCCCAGGCGGGGCTGGCATCCCGCAGGGCTGCAGAAGAGATGATTGCGGCAGGACGAGTCGAGGTCAATGGTGAACTCATCATTGAGCAGGGACGACGTGTCGATCCGGAGCGCGACGAGATCCGCGTCGACGGGTCCCGTATACCTACTGCCCGACGTCACGTCTACTATGTGCTCAACAAGCCGCAGGGCGTCGTGTCCACGATGGACGATCCAGAAGGGCGCCCCTGTCTGTCAGACATCGAGGGAGTGCCACACGGCATTCGTCTGTTCCACGTCGGTCGTCTAGACACCGAGACCTCTGGACTCATACTGCTGACCAACGATGGTGAATTCTCCAACCGCATGACCCACCCGTCGTACAAGGTTCTCAAGACTTACCTGGCTGACGTCGAGGGTCGGGTCGATGACAAGGTCATTCGTCGCCTTACGAAAGGCATCACCCTGGAGGACGGTCCGGTCAAGCCCGATGCCGTGCGACTCGTGCAGGCCAACGATGAGCACTCCTTGGTCGAGGTGAGCCTTCACGAGGGCCGAAACCGCATCGTGCGCCGCATGATGGACTCGGTTGCCCACCCGGTGCGTCGGCTGTCTCGGACGGCGATCGGCCCGGTCAGACTAGGGCGTTTGGGACGTGGCGATATGCGCGAGCTCACGCGCGAGGAGCTGGGGCAGCTTCTCGACCTCGTCGAGTTGTGA
PROTEIN sequence
Length: 246
MSDEQGIRLQKVLAQAGLASRRAAEEMIAAGRVEVNGELIIEQGRRVDPERDEIRVDGSRIPTARRHVYYVLNKPQGVVSTMDDPEGRPCLSDIEGVPHGIRLFHVGRLDTETSGLILLTNDGEFSNRMTHPSYKVLKTYLADVEGRVDDKVIRRLTKGITLEDGPVKPDAVRLVQANDEHSLVEVSLHEGRNRIVRRMMDSVAHPVRRLSRTAIGPVRLGRLGRGDMRELTREELGQLLDLVEL*