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NECEvent2014_5_1_scaffold_568_2

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(440..796)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WUX8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 245
  • Evalue 3.50e-62
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propioni similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 245
  • Evalue 4.90e-62
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 118.0
  • Bit_score: 243
  • Evalue 3.80e-62

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGTCAGGTGGAAGCGCCATCCGTGGAAGTCGCGTCGGTGCCGGCCCCATGGGAGAGGCAGAGCGCGGCGAGTCTGCCCCCCGCGAGTACGTCTCCTACTTCTGCGCCAACCACCACGTGATCCGCCCGGCCTTCTCGGCCGAGGCAGAGGTCCCCGACACCTGGGATTGCCCGAAGTGCGGTCTGCCGGCCAACCGTGATCAGGCCAATCCTCCTGCTCCGCCGAAGATCGTGCCTTACAAGACTCATCTGGCCTATGTGAAGGAGCGCCGCAGCGAGGCCGAGGCCGCTGCCATCCTCGCCGAGGCGCTGGAGAACCTGCGTCAGCGTCGACGTGATGGCGAGGTCATCTATTGA
PROTEIN sequence
Length: 119
MSGGSAIRGSRVGAGPMGEAERGESAPREYVSYFCANHHVIRPAFSAEAEVPDTWDCPKCGLPANRDQANPPAPPKIVPYKTHLAYVKERRSEAEAAAILAEALENLRQRRRDGEVIY*