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NECEvent2014_5_1_scaffold_4658_1

Organism: NECEvent2014_5_1_Propionibacterium_HGH0353_63-rel_12

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 3..254

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WTL9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 75.0
  • Bit_score: 146
  • Evalue 1.60e-32
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPH01241.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 75.0
  • Bit_score: 146
  • Evalue 2.20e-32
sigma-70 region 2 similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 75.0
  • Bit_score: 138
  • Evalue 9.20e-31

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 252
CTTCAGGACCCAGCAAGGGCACACACCAGGGATGCCGCGATGAAGGCGTTGAGGAAGAGTGTTGTCCGGCTGCCGGACAACCAGAGGCGTATCTGGGTCATGGCTCAGATCGACGGTCTCAGATACGCCGAGATTGCTGAGATTGAAGAATTACCGGTGTCCACCGTCCGTGGCCGTTTGGCCCGGGCGAGGGCCACCATTGCGGAGGAGATGGAACCATGGAGGGGAATCTCGCGTGTGGCGCGGACATGA
PROTEIN sequence
Length: 84
LQDPARAHTRDAAMKALRKSVVRLPDNQRRIWVMAQIDGLRYAEIAEIEELPVSTVRGRLARARATIAEEMEPWRGISRVART*